Cucurbita maxima (winter squash): 111482087
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Entry
111482087 CDS
T05246
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111482087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmax04121
]
111482087
Enzymes [BR:
cmax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111482087
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
HECT type E3
111482087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TRIP12_N
HECT
Arm
ARM_PUB
Motif
Other DBs
NCBI-GeneID:
111482087
NCBI-ProteinID:
XP_022983499
UniProt:
A0A6J1J7K5
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MGNRGQKRAEMVDRLPADKRTCSSLEFRPSSSNSSVQMHVTSTNSSPGIHENDMDTSSSA
SASSRSEGEHDKDSAYGSCDSDDAEQKHSDLRNCQRQRSSSDHERFKRILSSLGEESDTS
AQILLLTDLCEVLSFCMESSLSSTTSDSLSIILVNLVKLDSNSEIVLLALRALTYLCDAY
PRASSFIVRHGGVPALCQRLGVIVYLDVAEQCLQALERISQEHPVACLEGGAVMAVLTFI
DFFSSSIQRTALRTVVNICKKLPSECPLTLIEAVPILCNLFQHDDGELVENVARCMIKIA
ECAHQSCEILDGLCQHGLIQQVIRLINLNSRTSLSQTIYNDLLGILVKLSSGSIVAFKTL
YELDISNTLKEILSVYNLSHGMSSCAVVDGQRNQVCEVLKLLNELLPTEDAKAEQLSEKV
SFLAINPKQLQKFGLDILPLLVQVVSSGAKLYVCCGCLTIIYKFICLGESDMLVELLQNA
NISSFLVGVFTRKDHHVLMLALKITEIILQKLSSIFLKSFVKEGVYFAIDALITPEKYKQ
LIFPVFAGVHPSFGSCQKSTRENGRCLCYAFSSGCFSSVAETGSCKLDKDSVYSLANHIR
NNYFTDELCDTDKGVSDILQNLLTFSGALDDLLNLSLIKDTPAQDEEKFYTLLAEIMSKL
KCGEPISTFEFIESGIVKSFINYLTNGQYLRKKGEPQTISRQFSIMERRFEAFARLLFSS
SDHPSVNLPVRVLLRKLQISLSSLENFPVISSQGFKHRNYFATVPNGRCIPHPCVKVRFV
RGDGETDLCDITGDILTVDPFSSLNAIEGFLWPKVTRKKAEQSSEADSLREHQVKPLSNV
CSYFGVNPELVGSNSKSSDLPEIEVSVEVSTDEKSQGSASSSKKGTKPKLLLYLEGKQLE
PTLTLYQTILQQHIKENEAISGTKVWSQVYTIMYKSAGEVEDNSCNQFFSASDKGATLHF
SSFFCGILDCDLPSDLAKESPVYDVLFLLRIIEGMNRMAFHIMSHERIRAFSEGRISTLN
NIKLSVPSVSQNEFVNSKLTEKLEQQMRDFSAVSIGGMPLWCKELMDSCPFLFSFEARRK
YFRIVVFGMPQQPYVRSYSDLGTSNGVRSSSGGFPRKKALVLRNQILLSAAKMMDQYAHQ
KVLLEVEYDEEVGTGLGPTLEFYTLVSQEFQKYGLGMWRGDHDAFIPGKSLNIEGRETIE
SPFGLFPRPWLSTVDIGELQFSEVIKKFTLMGQIVAKAIQDGRVMDIYFSKAFYKLILGQ
EVSIYDIQSFDPELGTVLLEFQALVNRSKLLESVCEENSSSKLEFCYHDTNIEDLCLDFT
LPGYPDCRLTSSQDNSMVNTKNLEDYVSLVADATLYSGISTQIEAFKSGFNQVFPIEHLQ
VFTAEELERLICGEQDSWALSDLLDNIKFDHGYTASSPSIINLLEIIQDFDNEQQRAFLQ
FVTGAPRLPSGGFASLNPKLTIVRKHSSNMVDSDLPSVMTCANYLKLPPYSSKEIMKEKL
LYAITEGQGSFHLS
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgtggccaaaagcgtgcagaaatggtggacagattacctgctgataaacgg
acatgcagttcattggaattcagaccaagctcatctaattcatctgtgcaaatgcacgtg
acatccactaattcaagtcctggcatccatgagaatgacatggacacttcatcgtctgct
tctgcttccagtcgttcagagggagaacatgataaggattcagcctacgggtcttgtgat
tctgatgatgcagaacaaaaacatagtgatcttcgtaattgtcagaggcaaagatcatct
agtgatcacgaacgatttaaaaggattttatcaagtttgggcgaagaatctgatacatct
gcccaaatactactgctgacggatctatgtgaggttttatcattctgcatggaaagttca
ctatcgagcacgacatcagattcgttatctataattcttgtcaatctggtgaaacttgat
agcaactcagagatagtgctattggctttaagggctttaacttatttatgcgatgcatac
cccagagcatctagttttattgttcgccatggcggagttcctgccctctgtcagaggcta
ggagttattgtgtacttggatgttgctgaacagtgtctgcaagcattggaaagaatatca
caggaacacccagttgcatgcttagagggtggtgcagttatggctgtgttaacttttatt
gattttttttctagtagcatacaaaggacggctcttcgcacagtggtgaatatctgcaaa
aaacttccttccgagtgtccactaactttaattgaggctgttcctattctatgcaatctc
tttcagcatgatgatggggagctggtagagaatgtggctcgatgcatgatcaaaatagcc
gagtgtgcacatcaatcctgcgagattttggatgggctctgtcagcatggactgattcaa
caagtcattcgccttataaacttgaatagccgaacttctttgtcccagaccatttacaat
gatttgcttggtatacttgtcaaactatcttcaggatccattgttgctttcaaaactctt
tatgagctagacattagcaacactttgaaggaaatattatctgtttacaacctctcgcat
gggatgtcttcatgtgctgtagttgatgggcaacgcaaccaggtatgtgaagtcctcaaa
ttgcttaatgagcttctccctactgaagatgcaaaggcagaacaattgtctgaaaaagtg
tcgtttctagccattaatcccaagcaactgcagaagtttggcttggatatacttccgttg
ctagttcaggtggttagttctggtgcaaaattgtatgtttgttgcggctgcctaactatt
atctacaagtttatctgtctgggtgaatctgacatgcttgttgagttgcttcagaatgcc
aacatttctagtttcctggttggagtgtttactcgaaaagaccaccatgtgctgatgtta
gctttaaaaatcactgagattatcctgcaaaagctctctagtatatttttgaaatcattt
gtcaaggagggtgtctattttgcaattgatgcactgataaccccagaaaagtataagcag
ttgattttcccagtgtttgctggtgtccacccatcatttggttcatgtcaaaagtctaca
agagaaaatgggagatgcttatgttatgccttttcgagtggttgtttctcctcggtggca
gaaacaggcagctgcaagcttgacaaagattcagtctatagtcttgcaaatcatataaga
aacaattattttactgacgagttgtgcgacaccgataaaggagtgagtgatattcttcaa
aatcttcttactttttctggggccctagatgatctactgaacttgtccctaatcaaggac
actccagcgcaggatgaagaaaaattttataccttattggctgagattatgtcaaagctt
aagtgtggcgagccaatatccacctttgaatttattgaaagtggaattgtcaagtcattt
ataaattacctaactaatggtcagtatctgaggaaaaagggagaaccacaaactatatct
agacaattttcaattatggaaagaagatttgaggcttttgcaaggctactattttctagt
tcagatcacccatctgtaaacttgccagttagggtattgttaaggaaattacagatctca
ctttcttctttagagaactttcctgttatttctagccagggattcaaacataggaactat
tttgctacagttccaaatggtcggtgcataccacatccttgtgtgaaagttcggtttgtg
agaggagatggggaaacagatctctgtgacattactggggatatcctgactgttgacccc
ttttcttctttgaatgccattgaaggatttctatggcccaaagttaccagaaaaaaagct
gagcagtcctctgaagctgatagcctgagggagcatcaagttaaaccactctcaaatgta
tgttcttactttggtgttaacccagaactagtggggtctaacagcaagtcttcagatttg
cctgaaattgaggtatctgtagaagtcagcactgatgagaaatcacagggttctgcatct
tccagtaagaaaggcacgaagcccaaattgttactttaccttgagggaaagcagctggag
cctaccttgacactttaccagacaattctccaacaacacatcaaagaaaatgaagcaata
tctggcacgaaagtatggagccaagtatatacaataatgtataaaagtgctggagaggtg
gaggacaacagttgtaaccaattcttttctgcatccgacaaaggtgcaacgttgcatttc
tcttcatttttctgtggcattctagattgtgatctgccttctgacttggcaaaagaaagt
cctgtttatgatgttttatttcttctaaggatcatagagggtatgaacagaatggcattt
cacattatgtcacatgaaagaatccgtgctttttctgaagggagaattagtaccttgaac
aatataaagctgtcagttccttcagtgtcgcagaatgaatttgtaaacagcaaactgact
gaaaaacttgaacagcagatgagggacttttctgctgtttctatcggtggcatgccttta
tggtgtaaggaacttatggattcatgccctttcttatttagttttgaggcaaggcgcaag
tactttcgcatagtagtatttggcatgccacaacagccatatgtaagatcatacagtgac
ttgggaacctcaaatggcgtacgatcaagttctggtggctttcctcgtaagaaggcatta
gtactccgcaaccaaattctactttctgctgccaaaatgatggatcagtatgcacatcag
aaagtactcctagaagtggaatatgatgaagaagttggcactgggcttggtccaacatta
gaattctatactctagtcagtcaagaatttcagaagtatggccttggaatgtggagaggg
gatcatgatgcatttatacctggaaagagtcttaacattgagggtagagaaactatagaa
tctccatttggacttttcccccgtccatggctatcaactgttgatattggcgagctacaa
ttttctgaagtaattaaaaagttcacacttatgggacaaatagtggcaaaggccattcag
gatggtagggttatggatatctacttctccaaagccttctataaactaatacttgggcag
gaggttagtatatatgatatccaatcatttgatccagagctcggaaccgttctgctagag
tttcaagctttggtcaacagaagtaaattattggaatctgtttgtgaagaaaactcatcg
tccaaacttgaattttgttatcatgataccaatattgaggatctttgccttgattttact
cttcctggttatccagattgtcgcttgacttcttctcaagataattcaatggtaaataca
aaaaatttggaagattatgtctctcttgttgcagatgctaccttatattctggaatttcg
acacaaatagaagcatttaaatctggatttaatcaggtttttcccatagaacatcttcaa
gtttttactgcagaagaactagagcgtttaatatgcggagaacaggactcttgggccttg
agtgatctccttgacaatataaagtttgaccacggatatacggccagtagcccctccatt
attaatctgcttgaaattatccaagactttgacaatgaacagcaacgggcatttctacag
ttcgtgactggggcgccaaggcttccttccggaggctttgcgtctctcaatccaaagttg
accattgtccgaaagcactctagcaatatggtcgattccgacttacctagcgtgatgacc
tgtgcaaactatctcaagttgcctccttactcttcaaaggagataatgaaagagaagctg
ttatatgccataacagaaggacaaggctcgtttcatctttcgtag
DBGET
integrated database retrieval system
