Cucurbita maxima (winter squash): 111482241
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Entry
111482241 CDS
T05246
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111482241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111482241
03016 Transfer RNA biogenesis [BR:
cmax03016
]
111482241
Enzymes [BR:
cmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
111482241
Messenger RNA biogenesis [BR:
cmax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
111482241
Transfer RNA biogenesis [BR:
cmax03016
]
Prokaryotic type
tRNA degradation factors
111482241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
OB_PDCD11
Motif
Other DBs
NCBI-GeneID:
111482241
NCBI-ProteinID:
XP_022983703
UniProt:
A0A6J1J8H1
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MLANTCGLHFRPCYSHTPEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSL
VTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGET
IVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRP
LRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVALSEVPNSKAVAGVRIGLVN
DKFIVNPTTKEMEDSELDLVLAGTDSAILMIEGYGNFLPEEMLLQAVEIGQNAVIAICKE
VDALVRERGKPKMLDAIKLPPPQLYEHVEEIAGKELEKVLEIKNKIPRRKALLSLEEKVI
SILTEEGYVSLDTTSEVLEPIPDLVEDEDEDDEVVVDGEVDEGDVHIKPTTRRPILTLFS
VVDVKLVFKEVTSNFLRRRIVEGGIRSDGRTPVEIRPINSRCGLLPRAHGSTLFTRGETQ
SLAVVTLGDKQMAQRVDNLVDVDELKRFYLQYSFPPSCVGEVGRIGAPSRREIGHGTLAE
RALEPSLPAEDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPIKCPIAGIAMGL
VNDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNETGITAFQMDIKVGGITIPIMREA
LLQAKDGRKHILAEMLKSSPPPSKRLSQYAPLIHIMKVLPEKINLIIGSGGKKVKSIIEE
TRVEAIDTQDDGTVKITANDLSSLEKCKAIISNLTMVPTIGDIYRNCEIKTIAAYGVFVE
IAPGREGLCHISELSSDWLAKAEDVVKVGDKIDVKVIEVNEKGQLRLSRRALLPEADRDS
SSKDNTGNPSRNKAAMQKGPDKSTSKIAGKENMEQSNVQKGVLAPIGSSSEDAAKLQKKF
IRKEATATKDRPINKEKTKSTSS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgaacacttgcggcctccatttccgaccatgctattcccacacacccgaattc
tctcattctgggacatgccaaatctctctatcttcctattgccctcgcttccatgctttc
accaaaccgaagctgtcctctctgtcgcttcttcgcagtaagaaaaatggtaagagtttg
gtcacccgggctcttacgaattctgcggaacctgactcggttgcggcgagcgatggaata
cccagttctttgcggcctttctctgtcaaaattcctgttggggatagacatattttggtc
gagacgggccatatggggagacaagctagtggtgctgttacagtaactgatggagaaacc
attgtttatacatctgtttgtttggctgatataccaagcgagccttcggatttctttcca
ctttttgttaattatcaagaacgtttttctgcagcaggtcggactagcggaggattcttc
aaacgcgaaggaagagcaagagatcacgaggttctcatttgtagattgattgataggcct
ttgcgtccaactatgcccaaaggtttttaccatgaaacccagatattatcttgggttttg
agttatgatggtctgcacactcctgattgtttggcaattacagcagctggaatagcagtt
gcgctttcagaagttcctaattcaaaagcagttgctggagttcgaattggtcttgttaac
gacaagtttattgttaatccaactactaaagagatggaagactctgagcttgatttagta
cttgctggcactgatagtgcaatattgatgatagagggctatggtaattttctacctgaa
gagatgttgctccaagctgtagaaattgggcagaatgctgtaatagcaatttgcaaggag
gtggatgcgttagtaagggagcgagggaaaccaaaaatgctcgatgccattaagcttcct
cctcctcagctctatgaacatgttgaagaaattgctggtaaagagttagaaaaagtcctg
gaaattaaaaacaaaattccccgtagaaaggctctcttatcattagaagaaaaggttatt
tccatattgacagaagaagggtacgtcagtttagataccacttcagaagttctcgaacct
atacctgatttggtggaggatgaagatgaggatgatgaagtggtggtggatggtgaagtt
gatgaaggtgatgtccatattaaaccaactacacgccggcctatcttaacactcttttcc
gtggtagacgtaaaattagtatttaaagaagtgacatccaattttctcaggagacgcatt
gtggagggtggaataagaagcgatgggaggacaccagttgagatacgtccaattaactca
agatgtgggttacttcctcgggcgcatggcagcacacttttcactcgtggtgaaactcag
tcacttgcagtggttacgctcggggataagcaaatggcacaaagagtggacaaccttgtt
gatgtagatgagttgaaaaggttctaccttcagtactcttttcccccatcatgtgtcgga
gaagttgggcgtattggtgcacctagtcgaagggaaattggtcacggtacgcttgcagag
agagcacttgaaccatctttacctgctgaagatgattttccgtacaccatacgtgttgag
agtacaatcactgaaagcaatggctcctcaagcatggcatccgtttgtgggggttcattg
gctctgcaggatgctggagttccaattaagtgtccaattgctggaatagcaatgggtttg
gttaatgatacaaaggaatttgggggagatggaactccacttattctgtctgacataaca
ggatccgaggatgcttctggagatatggatttcaaggtagctggtaatgaaacgggcata
acagcgtttcagatggatataaaggtgggaggcattactatacccattatgagagaggcg
ctcctgcaagcaaaggatggccgtaaacatattcttgctgaaatgttgaagtcttctcct
cctccttcgaaaaggctttcacagtatgctccattgattcatatcatgaaggttctacct
gaaaaaataaacctaatcattggttctggcggaaaaaaggtgaagagcataatagaggaa
acacgagtcgaggctattgacactcaagacgatgggactgttaaaattactgcaaatgat
ttgtcaagcttggaaaaatgcaaagctattattagcaatctgacaatggttccaactatt
ggtgatatctataggaactgtgagatcaagacaattgctgcttatggtgtttttgttgag
atagcacctggacgagagggactttgccatattagtgagctgagctcagattggttggca
aaggcagaagatgttgttaaagttggagacaaaatcgatgtcaaagtcattgaggtaaat
gaaaagggtcagctccgccttagccgtcgagcgttgcttccagaggctgaccgggattcc
agttcaaaggataacacaggcaacccctccagaaacaaggctgcaatgcagaagggccct
gataaaagtacctctaagatagctggtaaggagaacatggaacagagtaatgtgcagaaa
ggtgttcttgcaccaattggtagttcatcggaggacgctgcaaaactgcagaagaagttc
atacggaaagaagcgactgcaacgaaagacagacctataaacaaagagaagacaaaaagc
acaagcagttga
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