Cucurbita maxima (winter squash): 111482579 Help Entry 111482579         CDS       T05246                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism cmax  Cucurbita maxima (winter squash) Pathway cmax04148   Efferocytosis Brite KEGG Orthology (KO) [BR:cmax00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     111482579  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cmax04131]     111482579 Membrane trafficking [BR:cmax04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     111482579 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin TPR_WDR35 zf-HC5HC2H AlaDh_PNT_N DUF2175 Motif Other DBs NCBI-GeneID:  111482579 NCBI-ProteinID:  XP_022984182 UniProt:  A0A6J1J1I5 LinkDB All DBs Position Unknown AA seq 1000 aa AA seqDB search MVHSAYDSFELLKDNPSKIESIESYGSKLLIGCSDGSLRIYSPKSSGSDRSPTSDFHSMS MELQKEPYVLEKNVTGFSRRSLVSMKVIDSRELLLTLSESIAFHKLPNLETLAVITKAKG ANVYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDTVKSMSWCGENICLGIRR EYVILNATSGALTNVFPSGRLAPPLVVSLPSGELLLGKDNIGVFVDQNGKLLQEGRICWS EAPSVVVIQKPYAIALLPRYIEIRSLWSPYALIQTIVLRNGRHLIDSNHALVVGLDNSAY GLFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRSAKESSIHIRYAHNLFDNGSYE EAMEHFLASQVDITYVLPFYPSIALPKTTLITETEKLMDMTLDDPHLSGGSSGFSDEMES PPHQLLESDGNTSLESKKVNHNTLMALIKFLQKKRHNIIEKATAEGTEEVVLDAVGDRYK KSYKGRGNIPISSGAREMAAILDTALLQALLFTGQSFAALELLKGLNYCDVKICEEILQK NKHYSALLELYRCNSMHREALKLLHQLVEESKTSESQTELTQKFKPEMIIDYLKTICGTD PMLVLEFSMTVLESCPTQTIELFLSGNIPADLVNSYLKQHAPNLQATYLELMLAMNESSI SGNLQNEMLQIYLSEVLDWYADLSAQHKWDEKTYSPTRKKLLSALETISGYHPEILLKRL PPDALSEERAILLGKMNQHELALSLYVHKIHAPELALSYCDRVYESVANQQSTKSSGNIY LTLLQIYLNPRRTTKYFEKRITNLTSPQNTGTPKLGSGPSSKVKGSRASKKIAAIEGAED TKISLSNTESSRSDGDTDETGEEGSSSIMLDEAMDLLSQRWDRINGAQALKLLPKETKLQ NLLQFLGPLLRKSSEAYRNSSVIKSLRQSENLQVRDELYNQRKSSIKITSDSTCSLCKKK IGTSVFAVYPNRKTLVHFVCFRDSQNMKAVSKGSPIRRRT NT seq 3003 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagtgcttacgattccttcgagctactcaaggataatccctccaaaatcgaa tccatcgagtcttacggctccaagcttttaatcggttgttctgatggatctctccgtatt tactccccgaaatcctccggttccgaccgatctccgacgtctgatttccactccatgtcg atggagctgcaaaaggaaccatatgtactggagaagaacgtcacaggattctcccggcgg tctttggtgtcaatgaaggtcattgattccagggagctccttttgactctctccgagtct atcgcgtttcacaaacttcccaatttggaaactcttgctgtaattaccaaggccaagggt gccaatgtgtattcctgggacgatcgccgaggtttcctgtgcttcgccaggcagaagagg gtctgtattttcagacacgacgggggacgaggattcgtagaggttaaagaatttggtgtc cctgacacagtgaagtcaatgtcttggtgtggagaaaatatttgtttgggaattagaaga gaatacgtgatattaaatgctaccagcggcgccttgactaatgtatttccttctgggagg ttagccccacctctggtagtgtcactaccttctggagaacttcttctgggaaaggataac attggcgtttttgtggaccaaaatgggaagcttcttcaagaaggtcggatttgttggtca gaggcaccttctgttgttgtcatacagaagccctatgccattgctttgttgccaagatat attgagattcggtctctctggtctccatatgcattgatacaaaccattgtccttcgaaat ggtcggcatcttattgacagtaatcatgctctggttgttggtttagacaattctgcctat ggcctcttccctgttccccttggtgcacagattgtacaactaacagcgtctggtaacttt gaggaagcgttggctttatgcaagttgcttccacctgaagattcaagccttcgatctgca aaggagagttccatccatatcagatatgctcacaatctttttgataatgggagctatgag gaggcgatggaacattttttggcatctcaagtggatataacctatgtgcttcccttttat ccttcaattgcccttccgaagactactttgattactgaaacagagaaattgatggatatg actttggatgatccgcatctttccggaggttcttcaggtttttcagatgaaatggagtca cctccacaccaactactggaatctgatgggaacacgtcattggaatcaaaaaaggttaac cataatactctcatggctctaattaagttcttgcagaagaaaaggcacaacattatcgaa aaagccactgctgaagggacagaagaggtagttttagatgctgttggagaccggtataag aaatcttataagggacgagggaacatccccatcagctctggtgccagggagatggcagca atactggatactgcgctacttcaagctctgctttttactggacaatcatttgcggctttg gaattattaaaaggcctgaattactgtgacgtcaaaatatgtgaagagatccttcaaaaa aataaacattattccgcactgttagagctgtaccgatgcaattccatgcatcgcgaagct ctaaaacttttgcatcaattagtagaagaatcaaaaaccagtgagtcccaaactgaactt acccaaaagttcaaacccgaaatgatcattgactatcttaagacaatttgtggaactgat cccatgctggtcttggaattctcgatgactgttcttgaaagctgtccgacacaaactatt gagctttttctatcaggaaatattcctgcagatttggtcaattcctatttgaagcaacat gctcctaacttgcaggccacatatttggaacttatgctcgcaatgaacgagagttcgatt tctggaaatctccaaaatgaaatgcttcaaatatatctttcagaagttctcgactggtat gccgatttaagtgctcaacataaatgggatgaaaaaacttactcccccacaagaaagaag ttgttgtctgctttggagacaatctcagggtatcatccagagattctattaaaacgtctt cctcctgatgcattatctgaagaacgagcaattttactggggaagatgaaccagcatgag cttgccttatctctctatgttcacaagatccacgctccggagttggcgctgtcctattgc gatcgggtttatgaatctgtagctaaccagcaatcaacaaaatcttctggcaatatatac cttactcttctacaaatatacctcaacccccgcagaacaacaaaatattttgagaagaga attactaacttaacatcccctcaaaatacgggcactccaaaacttgggtcaggtccttca tccaaagttaaaggaagccgtgcatctaagaaaatcgctgcaatagaaggtgcagaggac acgaaaattagccttagtaacactgagagtagcaggagcgatggtgacacagatgaaact ggtgaagaaggaagctcttcaattatgcttgatgaagctatggatctgttgagccaaagg tgggacagaattaatggagcgcaggcactcaaacttctacctaaggagacaaagttacag aacttgcttcaatttcttggaccgcttttaaggaaatccagtgaggcgtacaggaactct tcagtgataaagagtttgcggcaaagtgaaaacttgcaggtgagagacgaactctataac caaaggaaatcttccataaaaataaccagtgatagcacgtgctccctttgcaagaagaaa atagggacgagcgtcttcgcagtctatccaaacaggaaaacgctcgtgcacttcgtctgc tttagagactcacagaacatgaaggctgtgtccaagggttcacccataaggaggcgtaca tga

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