Cucurbita maxima (winter squash): 111482972
Help
Entry
111482972 CDS
T05246
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111482972
03015 mRNA surveillance pathway
111482972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111482972
03041 Spliceosome [BR:
cmax03041
]
111482972
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111482972
Spliceosome [BR:
cmax03041
]
Complex C
Other components
EJC/TREX
111482972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
111482972
NCBI-ProteinID:
XP_022984792
UniProt:
A0A6J1J351
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MGSNAAAVEKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFAANGPRRG
FVRPAERNDAEDQPPAKRRLSSAVVKMEEDGEINEEAEGKDAVKDTSLEETSGSDAAYQN
DGKQDHLRQSSSLRLDGNKRAARMDFEVPPAEHVPRVLPKNEDPSLVSRNKRMLGQLLGT
LERFRKEDKQLSGTEAFMRRTDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARV
AAKAEEKKLELLFLRWSEHHKKLCNFTRTKTEPSIYYLPNKPLDDDATLAEQRREEAFME
WKASRMEELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRL
EHGPKKRNIPGGSNNEDEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVASPKA
AENTVE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtaacgccgctgccgtcgagaaaacggaggaggatcttcgcaaggagatcgat
gagcttcaacgtcaacaacgggagattactgaacgccttcgtgatcctcgtggactccgg
aggggaggatttccgggacctgggcctagaaacttcgccgctaatggacctcgtcggggc
tttgttcgacctgcggaaaggaacgatgctgaagaccagccacctgctaagaggcggcta
tcgtctgcagttgttaagatggaggaggatggggagataaatgaagaagctgaaggaaag
gatgcagtgaaggatacatctctggaagaaacgtctggaagtgatgcagcctaccagaac
gatgggaaacaagatcatttgcggcagagcagttcattaagattggatggaaataaaaga
gcagctaggatggatttcgaagttccacctgcagagcatgttccaagggtattgcctaag
aatgaggatcctagcttagttagcaggaacaagagaatgctgggtcagcttttgggaacg
ctagagagattcaggaaagaagacaagcaactttcaggaactgaagctttcatgagaaga
acagattccttacaaagagctgagcaaagagcacgagaggaaagtgaaagattgaggcag
caagagcgtgaacaaattgcagagaaacgcaagagagatctgatgctcagagctcgcgtg
gctgccaaggcagaagaaaagaagttggaattacttttccttcgatggagcgagcaccat
aagaaactttgcaattttacaaggacaaagacagaaccttcaatttattacttgccaaat
aaaccattggacgacgacgcaaccttggccgagcagcgaagagaggaggcttttatggag
tggaaagcctccagaatggaggagctatctgagtatcagaaacagataggagaacagtat
attgctaatgttgagaaggacttggagaggtggcaaaatgcaaggagagcaagaaaagga
aacaacgacgtatcgaatttgcaggaaaccatggacaaagaattggacacccatagactt
gagcatggtccaaagaaaaggaacatccctggtggtagcaacaacgaggacgaagatgat
gtggaagatattaacgttggggaggatgacatgatagacgacgtactcggtgtcgaagat
aatgggcgcaggggcgaggaaacagcaaaacccgaagctgatgttgcgagtccaaaagct
gctgagaatactgtggagtag
DBGET
integrated database retrieval system