Cucurbita maxima (winter squash): 111483034
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Entry
111483034 CDS
T05246
Name
(RefSeq) histone acetyltransferase KAT6A-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03015
mRNA surveillance pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111483034
09122 Translation
03013 Nucleocytoplasmic transport
111483034
03015 mRNA surveillance pathway
111483034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111483034
03041 Spliceosome [BR:
cmax03041
]
111483034
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111483034
Spliceosome [BR:
cmax03041
]
Complex C
Other components
EJC/TREX
111483034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
111483034
NCBI-ProteinID:
XP_022984891
UniProt:
A0A6J1J6J9
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MSSKSKYQVLDNRPIDQWRVTELKEELKRRKLTIRGLKEDLVKRLDEALRNEREENAEET
DGVDGDPPVTNSDNNQVHASSAKDSNEDAKKILNVEDVEVQVDRNDSTAAGDDGASLNGC
PRVEEGSAIHVTSVETKITVTENVASEVALGVEGLQNMESKDNENSKVELEIEKSKPQVD
SEDSKSQLDDVKTELEVENENLKSQQADIVHDLSASDSQVSEVSPVLGSQVRTDSISTDS
VTINQMIELKENISADHVKLELDVKQEMVEPSSSIIVPDAGESHPMDVEEPSVNKNVEES
LANRDVVESPENKDVIEPIVNEDVEEKYDVKDMISEVHEKHDDTGFSEKLNLDRSSGDDS
IEDAIETKTVLGNNPKEMGEKNVKSEGLICKEEKVGDIAVRGSTADKKYLDTENEVSSLP
AEKRKLHDQAVVGNESVKRQCRWNAENLKIPEPQNTAHTSTSNSKDIHQSITPKRNFSRS
DSTASEDPSKERVVPPSPKPPTNSLKIDRFLRPFTLKAVQELLGKTGSVSSFWMDHIKTH
CYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKIRVESPQALKPAAVAPPV
STMPPPMPPEPSPRQPRQHFAPSPSLPPPPPTNNLAQAREQLPLPPPPALPDKVDTPIVT
LDDLFKKTKATPRIYYLPLSDEQVQVKRAAAARGKDTKQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaaatcgaaatatcaagttcttgacaatcgacccattgatcagtggagggtt
acggagttgaaagaggagcttaagagacgaaaattaaccatcagaggcctgaaggaagat
ttggtaaaacggttggatgaagcgcttcgaaatgaaagggaagaaaatgcggaggaaacc
gatggtgttgatggtgaccctccagttacaaatagtgacaataaccaagtgcatgcatct
tcggcaaaagactcaaatgaagatgctaaaaagattctgaatgtagaagatgttgaagtt
caggttgacaggaatgacagtactgcagctggggacgatggggctagtctcaatggttgt
cctagggtagaagaggggtcggctatccatgtcacttctgtggaaactaaaattacggta
actgaaaatgtggcttctgaagtagcgttaggtgtggaaggtttgcagaatatggaaagc
aaggataacgaaaattcgaaggtcgagttggagattgagaaatcgaagccccaggtggat
agtgaggattcaaagtcccagctggatgatgtgaaaacggagctcgaggtggagaatgag
aatttgaagtctcagcaggcagatatcgtgcacgacttgtctgcttcagacagccaggta
tctgaggtcagccctgttttagggtctcaagtaagaactgattctatttctactgattct
gtgacaattaatcaaatgattgaactaaaggaaaatatatctgctgatcatgtaaaatta
gaactagatgttaagcaggagatggtggaaccatcatccagcattattgtcccagatgct
ggcgaatcacatccaatggatgttgaagagccatctgtgaacaagaatgttgaagagtca
cttgcaaacagagatgttgtggagtcacctgagaacaaagatgttatagagcctattgtg
aatgaagatgttgaggagaaatatgatgttaaggacatgatttctgaggttcatgagaag
catgatgacacggggttttctgaaaagctaaatttagatagaagttctggggacgattca
atagaagatgccatagagactaagactgttttggggaataatcctaaagaaatgggagag
aagaatgtaaagagtgagggccttatatgcaaagaggaaaaggttggagacatagcagtg
cgaggttcaactgcagataaaaagtatcttgatacagagaatgaggtttcatctttgcct
gctgaaaaaagaaagcttcatgatcaagcagtggttggaaatgaatctgtaaagagacag
tgtaggtggaatgctgaaaacctcaaaattccagagcctcaaaacactgctcatacatct
actagtaattcaaaggacattcatcagtccattactccgaaacgcaacttctccagatct
gactccacagctagtgaagatccatcgaaggaacgtgttgttccaccatcaccaaaacct
cccacaaattcactaaaaatcgaccgttttctgcgtccatttaccctcaaagctgtgcag
gagcttctgggtaagactggtagtgtctccagcttctggatggatcacatcaagacgcat
tgctatgtaacttactcatcggtggaagaagccatgaagactagagatgctgtttacaac
ttgcaatggccaccaaatggtgggcgtcttcttatagctgagtttgttgatcctcaagaa
gtaaaaattcgagtggaatctccacaggctcttaaacctgcggcagttgctccaccggtt
tctactatgcccccaccgatgccaccagagccttcacctcgtcaaccaaggcagcatttt
gctccgtcaccttctttgccaccacccccacccacaaacaaccttgctcaagcaagggag
cagcttccactcccacccccacctgcacttcctgataaagtcgacactcccatcgtcaca
ttagatgacctcttcaagaaaaccaaagctactcctcgcatctactatttacctttatca
gatgaacaggtgcaggtaaaacgtgcagcagcagcaaggggaaaagacaccaagcagtaa
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