KEGG   Cucurbita maxima (winter squash): 111483057
Entry
111483057         CDS       T05246                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03010  Ribosome
cmax04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    111483057
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111483057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cmax03011]
    111483057
   04121 Ubiquitin system [BR:cmax04121]
    111483057
Ribosome [BR:cmax03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    111483057
  Archaea
    111483057
Ubiquitin system [BR:cmax04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   111483057
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 zf-C4pol TBK1_ULD DUF2604 Ubiquitin_5 UBL_UBAC1 Plexin_RBD Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 111483057
NCBI-ProteinID: XP_022984934
UniProt: A0A6J1HY41
LinkDB
Position
Unknown
AA seq 128 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaacccttactgggaagacgattacgttggaagttgagtccagc
gacaccatcgacaatgtcaaggctaagatccaggataaggaaggtattcccccggaccag
cagagacttatctttgctggaaagcagcttgaggatgggcgaacgctcgctgactacaat
atccagaaagagtcaactctgcacttggtgctcaggctccgtggtggtattattgagccg
tcgctgatggcattggctaggaagtacaatcaggacaagatgatctgccgcaagtgttat
gcccgcctgcaccctcgtgctgtcaactgcaggaaaaagaaatgtggacacagcaaccag
ttgaggccaaagaagaagatcaagtag

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