Cucurbita maxima (winter squash): 111483078
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Entry
111483078 CDS
T05246
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03440
Homologous recombination
cmax03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111483078
03460 Fanconi anemia pathway
111483078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmax03032
]
111483078
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111483078
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111483078
DNA replication proteins [BR:
cmax03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111483078
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111483078
Bloom's syndrome complex (BTR)
111483078
FA (Fanconi anemia) pathway
111483078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
COG2p_C
HHH
Motif
Other DBs
NCBI-GeneID:
111483078
NCBI-ProteinID:
XP_022984968
UniProt:
A0A6J1JBZ8
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MREDQGNSGDGLKVGGKCPRMNWLEHSKAHKDFTCQKKFLCSNFLFSLPEQKPSTTGATN
TGNLDYQMQSTQRIQRLQIEKAWHVLSNIQISCRHYAKPGKTRQVKGVFAELPPDTGRIT
SNSLSDANAGSQYKNVHKIFSEFSVDTTKPSSFLSNLSASSNIKAMEGQNEADGNNMARP
WMVNHSHSQRLDGSVNFATNQRNICSSFLEDEDDDIIENIDVDQIVEQYQSQSVCTPQPS
VSKLPPITPTIEKRQEESNFPDELCTNCSHGLKIVLCPEVSCHLQELKDRLISVSNDLLD
NVNNLSSVQIDKLRQERVHLNKQIQLLEKHISLDVVNDETRRSHLLATTVTPKTFHFETP
QGVEFRTESTLNTSHIHLHSEPRRIEPWNSMGSSYPDERFGMSSGPVEREPYIPKVIDVN
YIEGSNDKKWSSLNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGCDVFVLMPTGGG
KSLTYQLPALICPGVTLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWSEQQEILRELS
SDCSKCKLLYVTPEKVAKSDVLLRHLQSLNARSLLARIVIDEAHCVSQWGHDFRPDYQGL
GILKQKFPEIPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVMPKNKKCV
DDIDKFIKDNHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDPAQRSFIQKQWS
KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYS
DYIRVKHMISQGATEQSPLVSGYNRTNPGSTGRILETNTENLLRMVSYCENDVDCRRLLQ
LVHFGEKFDPGNCKKTCDNCLKSTTLIEKDVTDIAKQLVDLVRSMRQPFSSAHILEVYRG
SLSQFVKKHRHEKLSLHGAGKYLLKSEASRILHHLVIEDIFVEEVRKSDIYGSVSSLLKV
NESKVCSLLNGEQRITLRFPSIAKTNKLSKSEMTPAKGSLVSGKVYPNTDTPAQPQSEID
VQLSAKLYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKEELLDINGIGKA
KVSKYGDRILETIESTIKEFYGTEKNGSNSNDSNDSVKRRRDEYKDADEYFEDDNATKSF
DRSKKRATKTQNKVPKIHNSLKPVHTDQFVDSELDFDDSYYEVRDLEAKDNQDHRDDGRV
LPSWS
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaagatcaaggcaattcaggtgacggtctcaaagttggtggcaaatgtcctaga
atgaattggttggaacactcgaaagcacataaagatttcacatgccaaaagaagtttctg
tgctcaaattttctgttctctctaccagaacaaaaaccttctacgacaggagcaactaat
actgggaatttggactatcagatgcagagtactcaaagaatacaaaggttacagattgaa
aaggcctggcatgttctttcaaatatccagatttcttgtaggcactatgcaaaacctgga
aaaactagacaagttaagggtgtttttgctgagcttcctcctgatactggaagaattaca
tcaaatagtttgtctgatgccaacgctggttctcaatataagaatgtacataaaattttt
agtgaattcagtgttgatacaactaaaccttcgagtttcctatcgaatctttctgcatca
agtaatattaaagctatggagggccaaaatgaggcagatgggaataatatggccagaccg
tggatggtcaatcattctcattctcagaggttggatggctcggtcaattttgccactaac
cagagaaatatatgttcctcatttttggaggatgaggatgacgacataatagagaatatt
gacgtggaccaaattgttgaacaataccaatcacaatcagtctgcacacctcaaccttcg
gtttctaagcttccaccaattactccaacaattgagaaaagacaagaggaatctaatttt
ccagatgaattgtgcacgaattgcagtcatggtttgaagatcgtactatgcccagaagtt
tcatgccatttgcaggagttgaaagataggctaatctctgtatcaaatgatcttctcgat
aatgttaataacctgagctcagtgcagattgataagcttcggcaagaaagggtacatcta
aataaacaaattcagcttctagagaaacatatttctctcgatgtagttaatgatgaaacg
cgaaggtctcatcttttggcaacaacagtaactccaaagacttttcattttgaaacacct
caaggagttgaattcaggaccgaatcaacactaaatacttctcacattcacctacacagt
gagcctagaaggattgagccatggaattctatgggttcatcctatccagatgaaaggttt
ggaatgtcatctggtccagtggagagagagccatacatcccaaaggtgattgatgtcaac
tacattgaaggttctaatgacaaaaagtggagcagcctgaatttttcttggacaaaagaa
ttggaggctaataacaaaaaagtgttcggtaatcactcattccgtccaaatcaaagagag
gtcattaatgcgacaatgagtgggtgtgatgtctttgttttaatgccaactggaggggga
aagagcctaacgtaccagctcccagctttgatttgtcccggtgtaacactggtgatatct
ccacttgtgtctcttattcaagatcagatcatgcatctattgcaggcaaacataccggct
gcttacctaagtgctaatatggagtggagtgaacaacaagagattctacgagaactaagt
tctgattgctccaagtgcaagcttctgtatgtcactccagaaaaagttgctaaaagcgat
gttcttttgagacatctgcagagtttgaatgctcgttccttgcttgctagaattgttatt
gatgaagcgcattgcgtgagtcagtggggacatgattttaggccagattatcagggcctt
ggtatcttgaaacagaaattccctgaaattccagtattagctctaacagctactgcaaca
gcgagtgttaaagaagatgttgtgcaagctcttggccttgttaactgcataattttccgt
caaagtttcaatcggccaaatttatggtactctgtgatgccaaagaataagaaatgcgtg
gacgatattgataagttcatcaaagataatcactttgatgaatgtggaattgtttactgt
ctttcaagaatggactgtgaaaaggttgctgaaaggttacaggaatgtggacataaagca
gccttttatcacggtagcatggatcctgcccaacgctccttcattcagaagcaatggagc
aaagatgaaattaatataatttgcgctacagtggcttttggaatgggtatcaacaagcca
gatgttcgttttgtcattcaccattctcttccaaagtcgattgaaggctaccatcaggag
tgtgggcgtgcaggcagagatggtctgcgttcatcttgtgtgttgtattatagttacagt
gattatatacgagtcaagcatatgattagccaaggagccactgaacaaagtccccttgta
tctggatataatcgtaccaatccgggcagcaccggaagaatactagagacgaacactgaa
aatctgttgcgaatggtcagttactgtgaaaatgatgttgattgccgacgtttgctacaa
cttgtccattttggggagaagtttgatcctggaaactgcaagaaaacatgtgataattgt
ttgaagtccactactcttatagaaaaggatgtcactgatattgctaagcaactggttgac
ttggtgaggtcaatgaggcagccattttcatccgctcatatactggaagtctacaggggt
tccttgagccagtttgtaaaaaaacataggcacgaaaaattgagtctgcatggtgctgga
aaatatctcttgaaaagtgaggcttcccgcatattgcatcatcttgttattgaggatatt
tttgtggaagaagtgaggaaaagtgatatttatggttctgtctcatccttactgaaggtg
aatgaatccaaggtttgcagtcttttaaatggagagcagcgaattacattaaggtttcca
tcaattgcaaaaaccaataaattgagcaaatctgaaatgactccagctaaaggttctttg
gtatctggaaaagtatatcccaataccgatactcctgcacagcctcaatctgaaattgac
gtgcaactctcggcaaaattatattcttctttgcgaatgcttcgaactaatcttgttaaa
gaggctgcagatggtgttatggcatatcatatatttggaaatgccacattgcagcaaata
agccgaagagttcccagatcaaaagaagaattacttgatatcaacggcattggaaaggct
aaggtaagcaagtatggagaccgtattctggaaaccatagaatctaccatcaaggaattc
tatgggacagagaaaaatggaagcaacagtaatgacagtaacgattctgtaaagagacga
agagatgaatataaagatgcagatgaatattttgaggacgacaatgccaccaaaagcttt
gatagatcaaagaagagggcaacaaagactcagaacaaagttcccaagattcataattct
ttgaagccagtacatacggatcaatttgttgacagtgaacttgattttgatgacagttac
tatgaagttcgtgacttggaggctaaggataaccaggatcatcgtgatgatggaagagtg
ttaccttcatggtcataa
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integrated database retrieval system
