Cucurbita maxima (winter squash): 111483086
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Entry
111483086 CDS
T05246
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 36b
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111483086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111483086
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
111483086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
111483086
NCBI-ProteinID:
XP_022984980
UniProt:
A0A6J1JA27
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGGM
KGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNP
FRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRD
LVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGH
FVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ
KAAA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagacctccacgaggccgcggtggtggtggtgggtttaggggcaggggtgatggagga
cgaggtggtagaggcagaggtggcggtggaggcagaggcggcggtggaggaagaggtatg
agccgtggaggtggtcgcggaggtggaagaggccgtggtggaggaagaggaggtggtatg
aagggtggaagcaaagttgttgttgaacctcatagacatgagggtattttcatagccaag
ggcaaagaagatgctcttgtgacgaagaatatggtttctggagaatctgtctacaacgag
aagaggatatccgtacagaatgaagatggaacaaaagttgaatacagagtttggaaccca
ttcaggtctaagttggctgctgccgttcttggtggtgttgatgacatttggattaaacct
ggtgctcgagttttgtatcttggggctgcttcgggaacaactgtatctcatgtttcagat
gttgttggcccgactggtattgtatatgccgtcgaattctcccatagaagtggtagagat
ttagttaacatggcaaagaagcgcacaaatgttatacccatcattgaagatgctagacac
ccagccaaatatcgaatgttggttggtatggtggatgtgatattttcggatgttgctcag
ccagatcaggcaagaattttagcacttaatgcatcatattttctcaaagctggtggtcat
tttgttatatccatcaaggctaactgcatcgactcaaccgttcctgcagaggcagtgttt
gcaagtgaagtgaataagctaaaagcagatcaattcaaacccactgagcaagtgactctt
gaaccatttgagcgagatcatgcttgtgtcgttggtatctatcgggcaccaaagaaacag
aaggctgcagcttaa
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