KEGG   Cucurbita maxima (winter squash): 111483105
Entry
111483105         CDS       T05246                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111483105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111483105
   03036 Chromosome and associated proteins [BR:cmax03036]
    111483105
Spliceosome [BR:cmax03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111483105
 Complex B
    111483105
 Complex C
   U2 SnRNP specific factors
    111483105
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    111483105
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 111483105
NCBI-ProteinID: XP_022985010
UniProt: A0A6J1JA56
LinkDB
Position
Unknown
AA seq 1259 aa
MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV
ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAVPQKR
RNRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRL
ADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGAT
PAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM
FPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPF
MKPEDYQYFGALLNEEDEELLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF
GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED
YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP
FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA
LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT
KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD
RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA
RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA
KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM
LKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP
FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAAV
VLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVMFI
NT seq 3780 nt   +upstreamnt  +downstreamnt
atggatttagagattgccaaaacccaggaggagaggaggaagttggagcagcagttggct
tctcttagttcagtgactttcgatactgatctttatggtagtaatgataaagcgggttat
gtgacttccatcccggttaatgaggacgatgagaaccttgaagccttggacaacgaggtt
gctcgtaagttggcttcttatacggccccgaagtctctgttaaaggagatgccaagaggt
ggcgaagaagatgatgatatagggtttaagaaaccgcagaggattatcgatagagaggat
gattataggaaacgtaggttgaatagggtgatatcgcctgagcggcatgatgcattcgct
gcgggtgagaagactccggacccctctgtgaggacttatgcggaggtgatgagagaggag
gcgttgaagagggagagggaggagactttaagggctatagctaagaagaaggaagaagag
gaggccgctaaggcatcgggagaaaagccgaaggaatcagctgcagtgcctcagaagagg
aggaataggtgggatcaatcgcaggatgatggtggagaaaaaaaagcgaagacctcggat
tgggatttgcctgatacaacgcctggaaggtgggatgcaacaccaggccgggtgggggat
gccactcctggtgtggggagaaggaataggtgggatgagactccaactcctgggaggttg
gctgatttggatgcaactccagcaggtggtgttacgcctggtgcaacccctgctggaatg
acttgggatgcaactcctaaacttgctggaatggctacaccaactccaaaaaggcagcga
tcgcggtgggatgagaccccggcaacaatgggaagtgccactcctatgcccggagcaacc
cctgctgctgcatttactcccggtgtgactcctgttggaggggttgagctggctacccca
acacccggggctatcaatttgcgtggcccaatgacgcctgagcagtataatttgatgagg
tgggagagagatattgaggagaggaatcgcccattgactgatgaagaacttgatgccatg
tttccacaagagggatataagattctggaccctcctgcttcctatgtgccaattcgaaca
cctgcaaggaagttgctcgctacgccaactccgatgggaactcctctttatgccattcca
gaggagaatcgtggccagcagtttgatgttccaaaggaagcacctggtggcttgccattc
atgaagcccgaggattaccaatactttggggcattgttgaatgaggaagatgaggagttg
ttgtctccagaagagcagaaagagcggaagattatgaagctcttactcaaggttaagaat
ggaacacctcctcaaaggaaaacagctttaagacagctaactgataaggctcgtgagttc
ggtgcaggccccttgttcaaccgcattctgccactccttatgcagcctactctggaggac
caggagaggcatcttctggttaaggttattgacagagtgctttataaattggatgaattg
gttcgtccctatgtgcacaaaattcttgttgtgattgagccattgttgatcgatgaagat
tactatgcacgtgtagaaggtagagaaattatatccaatcttagtaaagcagctggtttg
gctactatgattgctgcaatgcgtccagatattgacaacatcgatgaatatgttaggaat
accactgcaagggcttttagtgttgttgcttctgcccttggaattcctgcccttcttcca
tttttgaaagctgtgtgtcagagtaaaaaatcatggcaagcacggcatactggaattaag
attgttcagcagattgctattctcattggatgtgctgttctaccacatcttaggtctctt
gtagaaattatagaacatggtcttaatgatgagaatcagaaggtgaggacaattaccgct
ttgtctctagctgcacttgctgaggctgcagccccatacggtattgaaagcttcgactca
gtcttgaagccactgtggaagggtattaggtcgcaccgtggtaaggtgttggctgctttc
ctgaaggctattggttttattattcctttgatggatgcattgtacgcctgctactataca
aaggaagtgatgtacattctcattcgagagttccaatcgcccgatgaagagatgaagaaa
attgttctcaaagtggtcaagcagtgtgtgagcactgagggagtagaggctgattatatc
cgcaacgatattctcccagaattctttaggaacttttgggttcgtagaatggctttagat
cgtagaaattacaagcaacttgtggacacaactgttgagatagcaaataaagtaggtgtt
gccgatatcgttggtagagttgttgaagatctcaaggatgaaagtgaaccttatagaaga
atggttatggaaacgatagagaaagttgttgcgaacttgggtgcatccgatatcgatgct
cgattagaagagctattgattgatgggattctttatgccttccaagagcagaccagtgat
gatgctaatgtgatgcttaatgggtttggcgcagttgtcaattctcttggacagagagta
aaaccgtatcttccccagatttgtggtaccataaagtggcgattgaataacaagagcgcg
aaagtgaggcagcaagccgcagatcttatttcaaggatcgcagtcgtcatgaagcagtgc
caagaggaacagctcatgggccatcttggtgttgtcttgtatgaatatttgggagaagaa
tacccagaagttctgggttcaattttgggagccttaaaggctattgtgaatgtcattggt
atgacaaagatgacgcctccgatcaaggatttgcttcccagattgacaccaattttgaag
aacaggcatgagaaagtgcaagagaactgcattgaccttgtcggtcgtattgccgatcgt
ggtgctgaatttgttccagcaagagaatggatgaggatctgctttgagttgcttgagatg
ctcaaagcccacaagaagggaatccgtcgtgctacggttaacacatttgggtacattgct
aaagccattgggccacaggatgttttggcgactttattgaacaatctaaaagtgcaggag
aggcagaatcgtgtttgcactactgtcgccattgctatagttgcagaaacctgttcgcca
tttaccgttctgcctgccctaatgaacgagtatcgtgtgccagagcttaacgtgcaaaat
ggtgtgttgaagtctctctctttccttttcgagtatatcggcgaaatgggaaaggattac
atatatgctgtgacgccattgctcgaggatgctctaatggaccgagacctggtccacaga
caaactgcagcctctgctgtgaaacatatggctctaggggtagccggtttagggtgtgag
gatgccttagttcacttgctaaactatgtatggccgaacatattcgaaacatcgccacac
gtcataaacgccgtgatggaggccgtggaaggaatgagggtggcattgggcgcagcggtt
gtgctcaactactgcctgcaggggcttttccaccctgctcggaaagttcgagaagtatac
tggaaaatctataactcattgtacattggttctcaggatgctcttgttgcagcttatcca
ggattagaggatggagaaaacaatgtgtattgccggccggaactggtaatgttcatctga

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