Cucurbita maxima (winter squash): 111483514
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Entry
111483514 CDS
T05246
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03410
Base excision repair
cmax03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111483514
03450 Non-homologous end-joining
111483514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111483514
Enzymes [BR:
cmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111483514
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
111483514
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
111483514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
NTP_transf_2
BRCT
IMS_HHH_1
BRCT_2
DUF3287
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
111483514
NCBI-ProteinID:
XP_022985526
UniProt:
A0A6J1J8G3
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MAPKRSKSQNLLQDPHGMFGGMVVLLIEKGVQARRLQIWKQKLVQMGACIEDRLSKRVSH
IFAASSDALLQKLDGERLARFGRKVLSYEWLEDSLRSGERASEDLYTVNVGLDGENGRDE
PQPSISKKLKLSPNNSEEGSVESGGDSIAPTLVTKTATDQTVTNPRTSDSLNSNVKLVQT
SMSYSPPDLNKNITDIFGKLINIYRALGDERRSFSYYKAIPVIEELPFKIESIDQVKHLP
AIGKSLQDHIQEILTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGCRTLD
DLQKESLTHAQKIGLKYFDDIKQRIPRNEVQDMESILKKAGEEVLPGVLIVCGGSFRRGK
SSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLC
TYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAESKGFRMDDTGLYPATQG
SGGKRGAKGSASLKFDTEKEIFEFLGFPWLEPHQRNL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaacgaagcaagagccaaaatctccttcaggatccacatggaatgttcgga
gggatggtcgtccttttaatcgaaaagggggtgcaggctcgccggttgcagatttggaaa
cagaaattggtccaaatgggtgcttgtattgaggatcgtttgtcgaaaagggtcagccat
atatttgctgcaagctcggacgctcttctgcaaaaactggacggtgagcgtttggcgcgc
tttggaaggaaggttctctcatacgagtggctagaagacagcttacgttcaggggagagg
gcgtcagaggatttgtacactgtaaacgtgggtttagatggggaaaatggaagagatgag
ccgcagccgtctatttccaaaaaactaaaactgtctcccaacaattcggaagaaggaagt
gttgaaagtggaggagattcaattgctccaactcttgtaacaaagactgctacagatcaa
acagtgactaatccaagaacttctgattctcttaatagcaatgtgaaacttgtgcagaca
tctatgtcatacagtccaccggatctgaataaaaacataactgacatttttggaaaactt
atcaacatatacagagcattgggtgatgaacgaaggtcatttagctactacaaggcaatt
ccagtaattgaggagctaccctttaaaattgagagcattgatcaggtgaaacacctgcca
gcaatcggaaaatcgttgcaggatcatattcaagagatattgacgacaggaaagttatcg
aagttggagcacttcgaaacagatgagaaggtccggacaatctcactttttggggaagta
tggggtattggaccggctacagctctgcgattatacgacaaaggatgtagaacccttgat
gacttgcagaaggagtcattaacccatgcgcagaaaatagggttgaaatattttgatgat
attaaacagagaattcctcgcaacgaggttcaggacatggagagtattctaaagaaggct
ggggaagaggttttgccaggggttcttattgtctgtggaggatcatttcggcgagggaag
tcgtcctgtggagatatggacattgtaatcacacatcccgatgggaaaagccatagaggt
tttctacaaagatacgttaagcatttaaaggatatgaagtttctaagggaggatctgata
ttcagcacgcacagtgaggagggaacagattctggtgtcgacacatattttggcctctgc
acgtatccaggaagagaattacgacaccgaatagatctgaaggtgtatccaagagacata
tatgcatttggattgcttgcatggacgggaaacgatgtactaaacaggaggctgagatta
gtagcagaatcaaaaggatttaggatggatgacactgggctgtatccagcaactcaagga
tctggtggtaaaaggggtgcaaaaggtagtgcaagtttgaagttcgatacagaaaaggag
attttcgagttccttggatttccatggctggaaccgcatcaaaggaatctatga
DBGET
integrated database retrieval system