Cucurbita maxima (winter squash): 111483974
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Entry
111483974 CDS
T05246
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111483974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111483974
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111483974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
111483974
NCBI-ProteinID:
XP_022986138
UniProt:
A0A6J1JFM3
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MQTDSGKLFVGGISWDTDEDRLKEYFSAFGEVVEAVIMKDRTTGRGRGFGFIVFADPSVA
DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGPGRTRKIFVGGLASTVT
ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV
KRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSG
RSVFTPFSSGYGMGVNFEIGLNPGYGGSSNFTNNLNYGRGLSPYYTGNSDRFGNIGYESG
NGGNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASVGGGIGGTAFANSGVNWGSSGI
LSQGGGNNVFSNSGNHNYGGIDSSYSIGAGGYGRNSGTVLPPASSFPTSTVGFDGPFADF
YNASYGDLTWRSSNFERDVSGPFGYGLGNAASDVSSRSSPGFIGGHSVNRRQSNRGNTT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatagtggcaagttatttgttggtgggatatcttgggatactgatgaagac
cggcttaaagagtatttcagtgcctttggggaggttgtagaagctgtcattatgaaggat
cggactacaggtcgcggtcgaggcttcggcttcatagtttttgctgatccaagtgttgcc
gatagagttataagggagaagcataatattgatggaagaatggttgaggcgaaaagggct
gttcctagaaacgaccagaacattgtaggtagaaccagtggtagcattaatgtttctcct
ggtcctggacctggacgaactagaaagatatttgttgggggcttagcatctactgttaca
gagagtgaattcaagaattattttgatcaattcggaacaattacagatgttgtggtgatg
tacgaccacaatacacttcggcccagaggtttcgggtttattacatatgattcggaagaa
gcggtcgagaaagttcttatcaagactttccatgaattgaatggaaaaatggttgaagtc
aagcgtgcagttccgaaagagttgtcaccaggccctagccgtagtccacttggtggatac
aattatggtcagagtagggtcaatagcttccttaatggttatactcaggggtatagttca
agtacaattggaggttatggggttagaatggatggtagatttagtccagtttctagtggt
cgaagtgtattcactccgttcagttcaggttatggaatgggcgtgaactttgagattggc
ttgaatccagggtacgggggaagttccaattttaccaataatctcaattatggacgggga
ctgagcccgtattatactggtaattcggatagatttggcaatatagggtatgagagtggc
aatggaggaaactcatccttcttcagctcagcaactcaaaacttgtggggaagtggaggg
ctcaacaatggaacaaactctgccaactccaatgctcatttgggatcagcaagcgttggc
ggcggcattgggggaactgcatttgccaattctggagttaactggggtagctccggaatc
ttgtctcaaggtggaggaaacaatgtttttagtaactctgggaatcataattatggaggt
attgacagtagttatagtataggagctggaggatatgggaggaacagtggtactgtttta
cctccagcatcatcatttcctacctcaactgtcggttttgacgggccttttgcagatttc
tacaatgccagttatggcgatctcacgtggcgatcttccaattttgaaagagacgtctct
ggaccctttggttatggactcggcaatgctgcttctgatgtctcttccagaagctctcct
ggttttattggtggtcatagtgttaataggaggcagtcaaacagaggaaacactacctag
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