Cucurbita maxima (winter squash): 111484127
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Entry
111484127 CDS
T05246
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03015
mRNA surveillance pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111484127
09122 Translation
03013 Nucleocytoplasmic transport
111484127
03015 mRNA surveillance pathway
111484127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111484127
03041 Spliceosome [BR:
cmax03041
]
111484127
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
111484127
Spliceosome [BR:
cmax03041
]
Common components
Common spliceosomal components
Cap binding complex
111484127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
111484127
NCBI-ProteinID:
XP_022986365
UniProt:
A0A6J1J7C7
LinkDB
All DBs
Position
Unknown
AA seq
251 aa
AA seq
DB search
MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGG
SHGNGHRHGRDYHNRKRYRDDDRHAHESSKRTSDYDSRRNPDHESRPQKNPRFRESGDSD
EEDDDDRKQRH
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttgttcaaggacccatcaaagctatctgtataccgggatagaagatttcag
ggaacacaagatgaatttgaactggctcttcagacttcaaccaccgtttacgtgggaaat
atgtccttttatacaacagaagagcaagtttatgagcttttttctcgagctggagaaatt
aagaagataatcatgggtttggataagaattcaaaaacaccttgtggcttttgttttgcc
ctatactattctcgggaggataccgaggatgctgtaaaatatataagtggaacaattctt
gatgatcggcccatccgtgcggattttgattggggatttcaggatggcaggcaatggggt
cgtggtcgaagtggtggacaggtgcgtgatgaatatcgaacagactatgatcctggtaga
ggtggctatggaaagttagttcagaaagagttggaagcacagaggcagcttgtggattac
ggtactggttcactaggctctatgccgtcagtcataccccagtacggtaaacatggtgga
agccacggaaatgggcatcgtcatggaagagattaccacaatcgtaagcgctaccgagat
gatgatcggcatgctcatgaaagctccaagagaacttcagattatgactctagaagaaat
cctgatcatgaatcaagaccgcagaaaaatccaaggttccgggagagtggagattctgat
gaagaggacgacgatgaccgaaaacagcgacactaa
DBGET
integrated database retrieval system
