Cucurbita maxima (winter squash): 111484192
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Entry
111484192 CDS
T05246
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111484192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111484192
03036 Chromosome and associated proteins [BR:
cmax03036
]
111484192
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111484192
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111484192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
111484192
NCBI-ProteinID:
XP_022986456
UniProt:
A0A6J1J7K7
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MFGSPNPFGQPSTSPFVSQPVFGQTANASNNPFAPKPFDSTSPFGSQTGNTVFGGTSTGV
FGAAQSSSPFPSNTTFGGSSSPAFGASSTPAFGSSSSSSFGGSSIFGQKPLFGGFGSTPT
QTNPFGNTNQQSQPAFGSNVFGSTSPFGAPSQSAFGATSTPAFGATSTPAFGATSTPAFG
AASTPAFGATSTPAFGATSTPAFGAPSTPAFGAASTPAFGSTSTPAFGSTGNAFGSLSTP
VFGSGGGFGASSTPAFGASSTPAFGASSAPAFGASSAPAFGASSTPSFSFGSTPAFGQST
SAFGSSTFGTNTSPFGAQTSPFGAQSTSAFGTSGFGQAGFGGQRGGSRVAAYTPTTEPDA
GSGSSQAAGKLESISAMPVYKDKSHEELRWEDYQSGDKGGPLPAGQSASSGVGFGVSSAQ
PNPLASSTFNQSSSPNPFSTATSTNPFAPKSSGFGAFGPSTTFSFNSSAFAPSSSSNPFA
STTAASTSSFLPSTTSQFGSSSLFSSSNAQPLASQSAFSSTTSPGTNLTFPSSLNFSNTQ
TSSLFQSTTPSIGQTGSAFGAPFSQSSLFSQPSSGVGGNLFSSSPSLLTSSNPMGFGQTS
GSFSMPFQSAQAQAPTSFFSNLGQAQPIGSSGFAGTSSMFGQSNFGQSPITQSPAVQPAP
ATNPFGTLPAMPQMSISRPGVAPSIQYGISSMPVVDKAAPVRISTFLTPRHLSNRRMRLP
VRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSRASLEKAL
PSKDTSVRENVKIADDTSSSAVNNLKDTNGNVVENGTCKDNIHVNKVNQKPNGVHEDHPA
SKEDCYRTFGGYRAGEAAIVYEHGADIEALMPKLRHLDYYTEPKIQELAAKERAEPGFCR
HVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNKPAE
VTILNIKCIDKQSGNQYTEGPKVEKYKELLRKKTEGQGATFISHDPVKGEWKFRVEHFSR
YNMEEVEDWE
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctcccaacccttttgggcaaccgtctaccagcccttttgtatctcaacca
gtctttgggcagactgccaacgcaagtaataatccttttgcaccgaagcccttcgacagt
acatccccatttggctcacagacaggaaatacagtatttggtggtacatcaaccggtgtg
tttggggcagcccaatcttcttccccctttccttccaacacaacatttggcggttcatcg
tcaccagcttttggagcatcgtcaactcctgcttttggtagttcatcatcttcatcattt
ggaggttcttccatttttgggcagaagcccctatttggaggctttggatctactcccact
caaacaaatccatttggaaatacaaaccagcaatctcagccagcatttggaagcaatgtc
tttggttccacatcaccttttggcgcccctagtcaatctgcatttggagctactagcact
cctgcctttggcgctacaagcacccctgcctttggtgccacaagcaccccagctttcggt
gccgcgagcactccggcatttggtgccacaagcaccccagcttttggggccacaagtaca
ccagccttcggtgcaccaagcaccccagcctttggtgctgcaagcactcctgcctttggt
tcaacaagcactcctgccttcggtagtactgggaatgcatttggttcattaagcacccct
gtttttggatctggtggtggttttggtgcttctagtactcctgcttttggagcttcaagt
actcctgcttttggggcttcaagtgctcctgcttttggggcttcaagtgctcctgctttt
ggagcttctagcactccatcctttagctttgggtccactccagcgtttggccagtctact
tctgcatttggtagtagcacttttggtactaatacatctccttttggagcccagacctct
ccttttggagcacaatctacatctgcatttgggaccagtggttttgggcaggctggtttt
ggtggtcagcgtggtggcagtagagtagctgcatatacaccaacaactgagccagatgct
ggaagtggcagttcacaagcagctggaaagttggagtctatatcagccatgcctgtttac
aaagataaaagtcacgaagagttgagatgggaggattatcaatcgggagacaaaggtgga
cctcttccagctggtcagtctgctagtagtggtgttggctttggtgtttctagtgcacag
cctaaccctctagcttcttcaacatttaatcaatcatcaagtccaaatcctttttctacg
gccacatcaaccaatccatttgcccctaaatcttctggttttggtgcttttggaccttca
acgacgttttcatttaattcttcagcatttgctccttcctcttcatcaaatccctttgca
tcgacaacagcagcatcaacctcctctttcctaccatcaacaacctctcaatttggaagc
tcatctctattcagttcatctaacgctcaaccccttgcctcacagtctgcttttagttca
actacatctccaggaacaaatcttacctttccatccagcttaaattttagcaatactcaa
acatcttcccttttccaatccacaacaccttcaattgggcagacaggttcagcctttggt
gctcccttttcacaatccagcttgtttagtcaaccttcgtctggggttggagggaatctt
ttctcaagctcgccatcactcctaacttcaagcaatccgatgggttttggtcaaacatct
ggctctttctctatgccttttcaatcggcacaagcacaggcacccacttccttttttagc
aacctgggacaagctcaaccaattggttcaagtgggtttgcaggaacttcaagcatgttt
ggccagagtaactttgggcaatcgcctatcacccaaagccccgcagtacaaccagcacct
gctacaaatccgtttgggacactccctgcaatgccacagatgtcaattagcagaccagga
gtagcaccttcgattcaatatggaatttccagcatgccggttgttgataaagcggctcct
gttagaatatcaactttcttgacgcctcgccacctatctaacagacggatgagattgcct
gtgagaaaatataatcctaagaatgatggcagtcccagggttccatttttcagtgatgat
gaagaaactccaagtacaccaaaggccgatgctctttttattcccagagagaatcctaga
gcattggttattcgtccaactgatcaatggccttcaagagccagtttagagaaagcattg
ccatcaaaggatacctcagtgcgtgaaaatgtgaagattgctgacgatacttcctcctcg
gctgtcaacaatttgaaggataccaatggaaatgttgttgagaatggtacttgcaaagac
aacattcatgttaacaaagtaaaccaaaaacctaacggggtccatgaggaccaccctgct
tcaaaggaagactgttacaggacatttggagggtacagagctggtgaggctgccattgtt
tatgaacatggggcagatattgaggcattaatgccaaagctccgacatttagattattat
accgagccgaaaattcaagaattagctgccaaagaaagggccgaacctgggttttgccgc
catgtgaaagattttgtggttggtcgtcatggttacggaagcatcaaattcttcggtgaa
acagatgtgcgaaggctggatctagagtccattgttcaatttaacaatcgcgaagtgatt
gtgtacctagacgagagcaagaaacccccttgcgggcaaggtctgaataagccagctgaa
gtaacaatactgaacatcaaatgcatcgacaagcaaagcgggaatcagtatacggaaggg
ccgaaagtagagaaatacaaggagttgctaaggaagaagacggagggtcaaggtgcgacg
ttcatatcccacgacccagtgaaaggggaatggaagttcagggttgaacatttcagcagg
tataacatggaggaagttgaagattgggaatga
DBGET
integrated database retrieval system
