Cucurbita maxima (winter squash): 111484885 Help Entry 111484885         CDS       T05246                                  Name (RefSeq) protein CTR9 homolog isoform X1   KO K15176   RNA polymerase-associated protein CTR9 Organism cmax  Cucurbita maxima (winter squash) Brite KEGG Orthology (KO) [BR:cmax00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmax03021]     111484885 Transcription machinery [BR:cmax03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     PAF1 complex      111484885 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_1 TPR_2 TPR_12 TPR_8 TPR_19 TPR_16 TPR_14 TPR_17 TPR_CcmH_CycH TPR_11 TPR_7 TPR_9 TPR_6 TPR_10 ARM_TT21_C ANAPC3 ARM_TT21_5th TPR_Slam Fis1_TPR_C NatA_aux_su DUF6584 UBA_N4BP1 SPOB_a Motif Other DBs NCBI-GeneID:  111484885 NCBI-ProteinID:  XP_022987292 UniProt:  A0A6J1J9Z0 LinkDB All DBs Position Unknown AA seq 1077 aa AA seqDB search MACVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFERVLQLDPENVEALVALAII DLNTNEAGRIRNGMEKMQKAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYHGLGQVQLKMGDFRS ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQEYLRKATKIDPRDAQAFLDLGELL ISTDEGAALDAFKTASILLRKEGQEVPTEVLNNLGVLHFEREEFELAERIFKEALGDGIW LDFIDGKLRWPAIEASASVLQYKDMEFFYQLEREGRSIVLPWKKVTSLFNLARLLELVHK IEVASVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNGALKVNDKCSNALSMLG ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS KELYTRVLVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQECKKTLLRAIHLA PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ LERRKLEDEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRR KKDRKGKSHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAG LEDSDAEDEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR NT seq 3234 nt NT seq  +upstreamnt  +downstreamnt atggcttgtgtgtacataccggtgcagaactcggaggaggaggtcagggtagttctcgat caactccctagggacgcttccgacattctcgacatactcaaggccgagcaagctccgttg gatctctggctaatcatcgcgagggagtacttcaagcaaggaaaattggaacaattccgt caaattctggaagaagggtctagcccagaaattgatgagtactatgctgatgttagatat gaaagaatcgcaatcttaaatgccttgggtgcatactacagctatctgggaaaaattgag acaaaacaacgagaaaaagaagaacatttcattttggctacacaatattacaacaaagca tcaagaattgacatgcatgagccttcaacttgggtcggaaaaggtcagcttttattgacc aaaggggaagtagaacaggcgtttgctgcattcaagattgttttagatggagatcgtgac aatgttcctgctcttctaggtcaggcatgtgttgaattcaaccgtgggcattattctgaa tcattagagctgtataagagggccttgcaagtttatcctgattgccctgctgctgtaaga cttggcataggcctctgccgctatcaattgaaacaatatggaaaggctcagcaagcattt gagagagttttgcagttggatccagaaaatgtcgaggcacttgttgctctagcaatcatt gatctgaacacgaatgaagctggtcgaattagaaatgggatggaaaagatgcagaaggca tttgaaatataccctttttgtgcaatggctctgaattacttggcaaatcactttttcttt accggtcaacactttttggtggagcaattgactgaaactgcacttgccattactaaccat ggacctacaaagtctcattctttttataatcttgctcggtcttaccatagcaagggagac tacgagaaagctggcttgtactacatggcatctgcaaaggaagctaataaaccccgtgag tttgtatttccttatcatggtttgggtcaggttcaactgaagatgggagattttagaagt gctctatcaaactttgagaaggttttggaggtttatcccgacaattgtgagacattgaaa gtacttggtcatatttatgttcagcttggacaggctgagaaggcccaggagtatttaagg aaagctacaaaaattgatccacgtgatgcacaggcttttttagatctgggagaattgttg atttcaactgatgaaggtgctgctttggatgccttcaaaactgctagcattctattaaga aaggaaggtcaagaagtacctactgaagtgctcaacaatctgggggttcttcactttgaa agagaagagtttgagcttgctgagcgaattttcaaggaggctttaggtgatggaatttgg ctagattttattgacggtaaattgagatggcctgctattgaagcaagtgcttctgttctt caatacaaggacatggaattcttttatcaactggagagggaaggtcgttcaattgtactg ccatggaaaaaagtcacaagtctatttaacctggctcgattattagagctagtgcataaa attgaagttgcaagtgtactttaccgcttgattttgtttaagtatccagactatgtagat gcttacctgaggcttgcatccattgcaaaagctagaaattatgttcaattaagcattgaa ttggttaatggtgctctgaaggtgaatgacaagtgctcaaatgccctttctatgctaggc gagcttgagttaaaaaatgatgactgggtcagggcaaaagaaactttccgggctgcaggt gaagccaccgatggaaaggattcttatgcgactctttctctggggaactggaactacttt gctgcacttcgaaatgagaaaagaaatcccaagttggaagctactcatttggaaaaatcc aaggaactatatacaagggttctggtacaacatcctgctaatttgtatgctgctaatggt gctgcggtaatcttggctgagaaaggtcaatttgatgtttcaaaagatatttttacacaa gttcaagaagctgcaagtgggaacatttttgtccagatgccagatgtgtggatcaatttg gcacacgtctattttgctcaaggaaatttttcattggctgttaaaatgtatcaaaattgc ttgcggaagttttattacaatacagattatcaaattcttctatatctatctcgtacatat tatgaagctgaacagtggcaagaatgcaaaaagaccctactgagagctatccacttggca ccttcaaattacactttaagatttgatgctggtgtagcaatgcagaagttttcagcttca acactacaaaagacgaaaaggactgcagatgaggtgcgttcaacagtagcggagctggaa aatgctgttcgtgtttttagtcagttgtctgctgcttccaacctccactttcatggcttt gatgagaagaagattgatactcatgttggttactgcaagcacttactagaggctgcagga gttcacctcaaagcagcagaacatgaagagcagcagatccgtcaaagacaagaactagca cgtcaagttgcattggcggaggatgcccgtcgtaaggcagatgagcagaggaaatttcaa ttggagaggagaaagctggaagatgaggaaagacggatgatgcaacaggagcagcatttt aaacgtgtgaaggagcaatggaagagcaccacacctgctaaacgaagagaaaggtcagag attgatgatgatgaagctggtgatagtgagaagaggagaaggaagggtggaaagaggaga aagaaagaccggaaggggaaatcacattatgagacagaagaggccgacaatgatatgatg gatgatcaagaactagacaatgaagataataacataagttatagggagtcccggagccaa atgaattatcaggacgatgatttggaagggaatgatcaggatgcccttgcagaagctggg cttgaagattctgatgccgaggatgaagcgggtgtaccttcatccaatgcagcccgacga agggccacctggtcggaatctgaagacgatgagcctatgaatatgcaacgagaatcccga cttcaaagagaaaactccgcaggactagagggtagtgatggagaaatcagatga

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