Cucurbita maxima (winter squash): 111484889
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Entry
111484889 CDS
T05246
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111484889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111484889
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111484889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
PAXNEB
Motif
Other DBs
NCBI-GeneID:
111484889
NCBI-ProteinID:
XP_022987300
UniProt:
A0A6J1JGF9
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Position
Unknown
AA seq
942 aa
AA seq
DB search
MNENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYFTVHGDNAVFIAKT
YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYIDLTKRLMGLAEFLDDSH
FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS
RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLRNAQ
ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
TRKDGVKFTNTKLKKLGDQYQKLVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD
VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKAIISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGSTEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
EFANFPSSVVALAREKASELEDFSTDSTTSANTGKEIPSKRKREFGSEDMSKGVVRARQF
LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaatgttgatgagcaaagcaagcttcccgagctcaaacttgatgctaaacag
gctcaagggtttctcgcattcttcaaaaccctaccccccgactcaagagctgttcgattt
tttgatcgtcgggattactttactgtccatggcgataatgcagttttcattgcaaagacc
tattaccgtactacaactgctttacgacaactgggcaatgtatctgaagctctgtctagt
gtgagtgtcagcaaaaatatgtttgaatccattgcccgggatcttcttttggaaagaatg
gaccatacattggagctttatgagggcagtggttccaattggagactgatcaaaagtggt
tcaccgggtaatattggcagctttgaagacgttttgtttgcaaataatgaaatgcaggac
agccctgctattgtggcactattaccgaacttccgagaaaatgggtgcattgttggacta
gcctacattgatttaacaaaaagattgatggggttggctgaatttctcgacgatagccat
tttactaatgtggagtcagctctggttggtcttggttgtaaggaatgccttctgcctcta
gacagtggaaagttcggtgatttaaaacctctacatgatgcattgacaaagtgtggtgtg
atgttaactgagagaaaaaaatcagaatttaaaatgagagatttggtgcaggatctttca
aggcttgtcaaaggttctgttgaacctgttagagatatggtatctggatttgaatttgcg
cctgctgccttaggagcattgctggcttatgcagaattactggcagatgaaagcaattat
ggaaactacaacatccagaaatacaatcttgatagctacatgaggttagactctgctgcc
atgagagcattaaatgtcctagaaagtaaaactgatgcaaacaaaaacttcagcctgttt
ggtctcatgaatagaacctgtactgctggaatgggtaaaagattgcttcatatgtggcta
aaacagcctctgttagacgtcaaagaaattaattctagactggatcttgttcaagcattt
gtggaggatactgctctccgccaggatttgagacaacatctcaaaagaatctcagatatt
gaacgattgacacagtatctcgagaagagaagagctggattacagcacattgttaaactt
tatcagtcaagtataaggcttccattcattaaaaatgccttggagaattatgaaggacaa
ttttcctcacttatcaaggagaagtacatggaatgtcttgagatctggactgacaacgat
catctgaacaagttcaataatcttgtggaaactgctgttgatcttgatcagcttgagaat
ggagaatatatgatttcatctagttacgaccctgctctgtccaagttgaggaatgcgcag
gaatcgatagagcagcaaatacaggatttgcataggcaggttgctaatgatcttgatctt
gcagttgataaggctttgaagttagacaaaggtacacaatttggacatgtttttagaatt
actaagaaagaagaaccaaaagtaaggaaaaagctctccacccacttcattgtccttgaa
acccgaaaagatggagtgaagtttacaaacaccaaacttaaaaagctgggtgaccagtat
cagaaattagtcgaggagtacaagaatttccagaaagagttggttcaccgagtaattgaa
actgcatcatccttcaatgaggtattcagacctttggcggaaatgctctctgaattagac
gttttactcggttttgctgatttagcctctagctgtccaactccttatactaggccagac
atcacatcatcggatgagggaaatattatattggaaggaagtaggcacccctgtgtggag
gctcaagactgggttaatttcataccaaatgattgtaaattagtaaggggagaaagttgg
ttccaaatcattactgggcctaatatgggcggaaaatctacatttatccgacaggttgga
gtgaacattctaatggcacaagttggttgttttgttccctgtgacaaagctattatttca
gttcgtgattgcatttttgcccgcgtaggtgcaggggactgtcaacttcgtggagtttct
acctttatgcaagagatgctcgaaactgcatctatactgaaaggatctacagagaagtct
ttgataatcattgatgaattgggccgtgggacatccacttatgatggatttggtttagca
tgggccatttgtgaacatcttgttgaagtgattaaagcacccactttatttgcaacccac
ttccacgaactaactgcactagctcatggcaatactgatcttgagccccatggaaagcaa
attgttggtgtggcaaattttcatgtcagtgcacacatagactcatcaaatcacaagttg
acaatgctgtacaaggttgaacctggagcttgtgatcaaagctttgggattcatgtagca
gaatttgcaaactttccttctagtgtcgtggcacttgccagagaaaaggcttctgaactg
gaagatttctccactgattcaactacttcagccaataccgggaaagagataccatcaaag
cgaaaacgcgagtttggttcagaagacatgtccaaaggtgtagtgcgggctcgtcagttt
ttagaggagtttgctaatcttccattggataaaatggatctaaaggaagctctacaacaa
gtgagccaattacgagatggtttgaagaaggatgccgtggactctaattggctccaacaa
ttcctttaa
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