Cucurbita maxima (winter squash): 111484957
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Entry
111484957 CDS
T05246
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111484957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111484957
03110 Chaperones and folding catalysts [BR:
cmax03110
]
111484957
03029 Mitochondrial biogenesis [BR:
cmax03029
]
111484957
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmax04147
]
111484957
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111484957
Messenger RNA biogenesis [BR:
cmax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111484957
Chaperones and folding catalysts [BR:
cmax03110
]
Heat shock proteins
HSP60 / Chaperonin
111484957
Mitochondrial biogenesis [BR:
cmax03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111484957
Exosome [BR:
cmax04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111484957
Exosomal proteins of other body fluids (saliva and urine)
111484957
Exosomal proteins of breast cancer cells
111484957
Exosomal proteins of colorectal cancer cells
111484957
Exosomal proteins of bladder cancer cells
111484957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
PhaC_N
Motif
Other DBs
NCBI-GeneID:
111484957
NCBI-ProteinID:
XP_022987392
UniProt:
A0A6J1JIS5
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MASTFTAMSSVGTLAAPGSRVVDKKLLLSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
SAMAKELHFNHDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
RGIEKTAKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA
TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
LLRLASKVDAIKESFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcttctactttcacagccatgtcttcagttggtacccttgctgcacctggaagccgt
gtcgtggataaaaagcttctattgtcttctgataagttgacttctcgcacgtccatttct
tcatttgcgctcccgaaaagacagagcgtagttcttaggagaaaccgttcttccaagatc
tctgccatggctaaagagttgcacttcaaccatgatggttcggctattaagaaattacag
aatggtgtgaacaaacttgcagacttggtcggagttactcttggtcctaaaggaagaaat
gtggttcttgagagcaagtatggctccccgaaaattgtcaatgatggtgtaaccgttgca
aaagaggttgagttggaggatccagttgagaacattggtgctaagctagtcagacaagct
gctgcaaagaccaacgacttagccggagatggaacgacaacttcagttgttttggctcag
ggtcttatcgctgaaggtgtcaaggttgtggcagctggagcaaaccctgttcttatcaca
agaggcattgaaaaaacggccaaagctctggtctctgaactcaaacaaatgtcgaaagag
gttgaagacagtgaattggctgatgtggctgcagttagtgctggaaataactacgaagtg
ggtaacatgatagccgaagccatgagcaaggtaggacggaagggtgtggtgactcttgaa
gagggaaggagtgccgataacagtctctatgtcgtcgaaggaatgcagtttgacaggggt
tatatctctccttattttgtcaccgatagtgagaaaatggccgtggaattcgataattgc
aagctgcttcttgttgacaaaaagatcactaatgcaagggatcttattaacatactggaa
gaggctatcagaggtggctatcccgttttgataatggccgaggatatcgagcaagaagct
ctggcaactcttgtagtaaacaaactgagaggatctttgaagattgctgcacttaaagct
ccagggtttggcgagcgcaagagccagtaccttgacgacattgctattcttactggagcc
acggttatcagagaggaggtcgggctttccttagacaaagctggaaaggaggtacttgga
actgcatccaaggtcgtgcttaccaaagataccacaacaattgttggcgacggtagcacc
caagacgcagtttctaagcgtgttgcacagattaaaactctgattgaggctgcagaccag
gactacgagaaagagaaacttaacgaaagaattgccaaactttctggtggtgtagcagtt
atacaggttggagcacaaaccgagaccgaactcaaggaaaagaaactgagagttgaagac
gctcttaacgctacgaaggcagctgttgaggaaggtattgttgttggtggtggttgcacc
ctccttagactcgcatcgaaggtcgacgctatcaaggaatcctttgaaaatgatgaagag
aaggttggagcagacattgtcaagagagcattagcttatcccctcaagctgatagcaaag
aacgctggtgtcaacggtagcgttgttagcgagaaggtgttgtccagtgacaactttaga
tatggatacaatgctgcaactgggaattacgaagacttgatggctgctggaatcatcgat
ccaaccaaggtggttagatgctgcttagaacacgcagcttcagtggcgaagacattcttg
atgtcggactgtgtggtggtggagatcaaggagcctgaaccagttgctgccggcaatccc
atggacaattcagggtatgggtactga
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