Cucurbita maxima (winter squash): 111485005
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Entry
111485005 CDS
T05246
Name
(RefSeq) serrate RNA effector molecule-like
KO
K27103
serrate RNA effector molecule
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111485005
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
111485005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
111485005
NCBI-ProteinID:
XP_022987467
UniProt:
A0A6J1JAF8
LinkDB
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Position
Unknown
AA seq
789 aa
AA seq
DB search
FVRSVNETPDFLDFNSPTLWVHFRVSFLLLLLLLQLLCKIMAAADTADESLDRRRDQQEK
SSEEQPHSSPPPQLAAAAPPPPSRRRDRDERDRRDDRDVDRPPNRRNDNYDRNRSPPTLP
PRDRDRDRDRDYKRRNSLSPPPPYRDRRHSPPRRSPPPFKRSRRDDGGGYDGRKGSPRGG
FGPGDRRFGYDYGGGYERELRGRPGYVDERSLGRYIGRSSGGYQDWDSSRGGHGDPLNAG
AGQREGLMTYKQFIQELEDDILPAEAEPRYQEYKSEYITTQKQSFFDSHKDEEWLKDKYH
PTNLVTVIERRNELAQRTAKDFLIDLQSGTLELGPGINAAATNKSGQTSEPNSDDEADND
GKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDIEQAQSLVRKLDSEKGIEENILCG
SDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETRE
AKGLRHVREEGKNSNMAGGADEWEKKLDSRWQERLRGQDPLETMTAKDKIEAAALEAFDP
YVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYM
NDADAPGGTPVMQQSLPKDKPQRRRMNLDARLKDDRGNRRDRDNWANGGDRFDRSENPQS
NDFQSANDGSDGGNLDDPMFDTFGGQGRHVAPFASEMPPPVLMPVPGAGPLGPFVPAPPE
VAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILALSPGFRQDPRRIRSYQDLDAPEDE
VTVIDYRSL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
tttgtcagatcagtgaacgaaactccggactttctcgacttcaattctccgacgctttgg
gttcattttagggtttcgtttcttcttcttcttcttcttcttcaattgctgtgtaaaatc
atggccgccgccgataccgccgacgagtcgttggaccgccgtcgtgatcaacaagagaaa
tcgtctgaggagcaacctcattcctcgcctccgccgcagttggctgctgctgctcctcct
cctccttccagaagaagggatagagatgagagagataggagagacgaccgggatgttgat
cgtcctccgaaccgacgcaacgataattacgatcgtaatcgctctccgcctacgctgcct
ccgagggatagggatagagacagagatagggattataaacggcggaacagtcttagtccc
ccaccgccttacagggatcgtagacactcgcctcctagacggtctccgccacctttcaag
cgttcccggagagatgatgggggtgggtatgatggaagaaagggaagccctagaggaggt
ttcgggcctggcgataggaggtttggttatgattatggtgggggatatgagcgcgaactg
cgaggccggcctggatatgttgatgaaaggtctcttggtcggtacattggtcgttcatct
ggtggctatcaagattgggattctagtcgtggtgggcatggtgatccactcaatgcagga
gctggccaaagagaaggtttgatgacatacaagcaatttattcaagagcttgaggatgat
atactgcctgcagaagctgagcccagatatcaagaatacaagtctgagtatattacaaca
cagaaacaatccttttttgattctcataaggatgaagaatggttgaaagacaaatatcat
cctaccaacctagttactgtcattgaaaggaggaatgaacttgcacaaagaactgctaag
gattttttgattgacctgcaaagtggaacactggaattaggtccagggatcaatgcagca
gctacaaataaatcagggcagactagtgaaccaaattcagatgatgaagcagacaatgat
ggcaaacggaggcgtcatggtagaggaccagcaaaagaaatggatcttctttctgctgct
cctaaggcccaccctgttagctctgaaccaagaagaatccaaattgacattgaacaagct
caatctcttgtccgtaaacttgattctgagaaaggaatagaagaaaatattttatgtggt
tctgatagtgacaaactaggtcgggataaagcacatggcggctcttctggcccagtcatt
atcatacgagggttgacaaccgttaaaggcttagagggtgttgaactattagacacactt
ctcacatatctgtggcgcatccatggcttagattactatggaatggttgagactagagaa
gctaagggtcttcgtcatgtaagagaagagggaaagaactctaacatggctggtggtgca
gatgaatgggagaagaaacttgattcgcgttggcaagagagattgagaggtcaagatccg
ttggaaacgatgactgccaaggataaaatagaggctgctgctcttgaagcttttgatcca
tatgttcgtaagataagagatgagaaatatggatggaagtatggctgtggagccaagggt
tgcactaagctgtttcatgctcctgagtttgtgcacaagcatcttaacttgaaacatcca
gagcttgtgatggagctgacttcaaaagtgcgtgaagagctgtatttccaaaattacatg
aatgatgcagatgctcctggagggacgcctgttatgcaacaatcgcttccgaaggataag
ccacagagacgtaggatgaatttagatgctcggctgaaggatgacagaggcaatcgcagg
gaccgtgataattgggcgaatgggggtgacagatttgatagatctgagaatccacaatca
aatgatttccaatcagcaaatgatggttcggatggtggaaaccttgatgatcctatgttt
gatacttttggtggacaaggaaggcatgttgctccttttgcctctgaaatgccaccacct
gtgcttatgcctgttcctggtgctggtccattaggaccttttgtccctgctccacctgaa
gttgcaatgagaatgttgcgggaacaaggaggtccacctccatttgagggtggtggtaga
aatggaaggccaggacctcaattaggtggatctgctccaattcttgccctatctccaggt
tttcgacaggatcctcgtcgaatacggagttatcaagacctagatgcccctgaggacgaa
gtcactgtaatagattatagaagcttgtag
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