Cucurbita maxima (winter squash): 111485046 Help Entry 111485046         CDS       T05246                                  Name (RefSeq) dicer-like protein 4 isoform X1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism cmax  Cucurbita maxima (winter squash) Brite KEGG Orthology (KO) [BR:cmax00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:cmax03036]     111485046 Chromosome and associated proteins [BR:cmax03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     111485046    microRNA pathway     RISC loading complex      111485046 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 DEAD Helicase_C ResIII DND1_DSRM dsrm PAZ Cas3-like_C_2 IstB_IS21 Motif Other DBs NCBI-GeneID:  111485046 NCBI-ProteinID:  XP_022987502 UniProt:  A0A6J1JAJ5 LinkDB All DBs Position Unknown AA seq 1658 aa AA seqDB search MPDGETNSTTADSVNFQPTISASVERFMGLSPVDDQGEGSSIRTSGKDPRRIARKYQLEL CKKALEENIIVYLGTGCGKTHIAILLIYEMGHLIRRPQKGICVFLAPTVALVQQQAKVIE DSIDFKVKVYCGGSKCLNSHYDWEREMEEYEVFVMTPEILLRNLHHCYIKMEFVELLIFD ECHHAQVKSDHSYAEIMRVFYKANEHKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKL LDAKVYSVEDREELEAFVSSPRFKIYYYGPVATGSSSSFMTYCCPLEDVKCQCIVALGQM KGEHEGLLATKKLLCRMHKNIIFCLENLGVWGALQASKILLSEDNSERSELIEAAEGNPK YDSISDRYLNQAAEIFASGCKIDAGVSDMLNVDILKEPCFSKKLLRLIGILSSFRHRPNM KCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGEL NLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKDLG LIDEFHKDEKRMNREISSRSSIETFDGHEESIYRVVSTGASVTSGRSISLLHEYCSKLPH DTYFDPKPKFFYCDDLGGTICHAILPSNAPIPQIVSRPQPSGVAAKKDACLKAVEELHKL GALSDYLLPMRDNANEGELELDSDSDSSEDETSRLELHEMISPAAFKESWTGFGYVILYC YHIKFTPNPEDRIYKEFGLFVKAPLPQEAVRMDLELHLAHGRSVKVNLMPSRVVELLENE ITQAECFQEMFLKVILDRSEFVHDYIPLRNNVSRSISSTSYLLLPVIVHDNEGSVFIDWK VIRRCLSSQIFQNHACSIIKETASSDTHLMLYDGRRRSSDIENSLVYVPYKREFFFVTNI VRRKNGYSQYKDSGSLSHFEHLKTRFGIHLKYPEQPLLCAKPLFSLHNLLHNRKQKDSEA PYLEEYFIDVAPELCQLKITGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAAFPAG AEVTANRILEALTTEKCQERFSLERLEILGDSFLKFAVARYLFLAHDKFDEGELTRRRSY LVKNINLFKLATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRNDIHSHDNATNNAK FSETKCSKGHHWLQKKTISDMVEALIGAFLVDSGFKAAIAFLKWIGIKVEFEASQVTNAL VASKAYVLFADTINISALQSSLGHKFLHKGLLLQALVHPTYHKHGGGCYQRLEFLGDAVL DYLIMSYLYSVYPKLKPGLLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSASLESDIKSY VDFIKAPPSERDSLEQPRCPKPLGDLVESSVGAVLVDTGFDMNYVWKIMLSFLDPIMSSS GFQLSPIRDIIEVCQNCGWKLQFNPSKMEKYYSVEAEVKGDDFHATASAVNRRKKDAEKI AANAILRKLKAQGFIPEVNSLEKILKSSEKMKPKLIGYDETPSVTMDRIDDGLEFSGADL DPLVHREVGNSRPFRITRMSETLASSSGAAGEQLKPSIPLEGHDSSTDLLSSSSSSSSSS SSSSSSSGRSGKTTARSRLYEVCAINHWNHPSFNCMNEEGPSHLKMFTYKVVLEIEEAPD TIFEFFGAPHLTKKAAAEHAAEAALWYLKKERYLGDTD NT seq 4977 nt NT seq  +upstreamnt  +downstreamnt atgcctgatggagagaccaattctacgactgccgatagcgtcaattttcagcccactatc tctgcgtcggtcgagagatttatgggtctgtctccggtggatgatcagggagagggttca agtataagaacatcaggcaaagatccaaggagaatcgcaaggaaatatcaattggagctg tgcaagaaagctttggaagagaatatcattgtttatcttgggacaggctgtgggaagact cacattgctatacttctgatatacgagatgggccacttaatcaggaggccccagaagggt atctgtgtttttctggctcctaccgttgctttagttcagcagcaagcaaaagttatagaa gattctatagatttcaaggtcaaggtctactgtggaggttccaaatgcttgaatagccat tatgattgggaaagagagatggaagaatatgaggtttttgtcatgacccctgaaatatta ctgcgtaatttacaccactgctatatcaagatggagtttgttgaacttctaatatttgat gaatgccatcatgcccaagtcaaaagtgaccattcttatgcagaaatcatgagagtgttt tataaagcaaatgagcataaaagaccccggatatttggcatgactgcatctccagttgta ggaaaaggtgcttgcaatcagcaaaatttatccaagagcatcaatagtcttgagaagtta cttgatgcaaaggtttattcagttgaagatagggaagaactggaagcgtttgtgtcatca ccgcgttttaaaatctattattatggtcctgttgcaactgggtcgtctagctcatttatg acttactgttgcccacttgaggacgtgaaatgccagtgtatagtggctcttggtcagatg aaaggtgaacacgaaggtctgctggccaccaagaaactgttgtgcaggatgcacaaaaat atcatattttgtttggaaaaccttggtgtttggggggcattgcaggccagtaaaattctc ctaagtgaagataactctgagcgaagtgaattgatagaggcagcagagggaaacccaaaa tatgactccataagtgatagatatcttaatcaagctgctgaaattttcgcatcgggttgc aagatagatgctggggtgtcagatatgttaaatgttgatattttgaaagagccatgtttc tcaaagaagcttttacggcttattggaattctttcttccttcaggcatcgacccaacatg aagtgtataatttttgtgaatagaatagttatagctaggtccttgtcgtacatacttcag aacctcaaatttctggcatattggaagtgcgattttctcgtcggagtccactcaaagttg aggagcatgtcaaggaagaccatgaaccatattcttacaaaattccgatcaggggagcta aaccttttgattgcaacgaaggttggtgaagaagggcttgatattcagacctgctgtctt gtgatacgatttgatcttcctgaaacagtgtctagctttatacaatcaagaggtcgagca cgaatgcctcagtctgaatatgccttccttgttgatagtggaaacgaaaaggatctaggg ttgatagatgagtttcataaagatgaaaaacggatgaacagagaaatttcttctcgctca tccattgagacatttgatggtcatgaagaaagcatctatagagtggtttcaactggtgca tctgtcacttctggaagaagtatatctttactgcatgaatattgctcaaaacttccacac gacacgtacttcgaccccaagccgaagtttttctattgtgatgatttaggaggaactata tgtcatgcaattctgccctccaatgcaccgatcccccaaattgtcagcagaccacagcct tctggggttgctgctaaaaaggatgcttgtctaaaagctgtagaggaattgcataaactt ggtgctctcagtgactatctcttgcccatgagagacaatgctaatgaaggggaattagaa cttgactctgattctgacagctccgaagatgagacttcgcgactggagcttcatgagatg atatctcctgctgctttcaaagagtcttggactggctttggatatgttattctttactgt taccatattaaatttactccaaatcctgaagataggatctacaaagaatttgggttattt gtgaaggcaccacttccccaggaggctgtgagaatggaccttgagcttcatcttgcacat ggaagatctgtaaaggtaaatttgatgccatcaagggtcgtcgagcttttggagaatgag attacccaggccgagtgttttcaggagatgtttcttaaggtcattttagacagatcagaa tttgttcacgactacattccattgaggaataatgtctctagatctatttcatcgacatct tacttgttgcttcctgtgattgtccacgataatgagggatcggttttcatagattggaaa gttattagaagatgtttatcctcccaaattttccagaatcatgcatgctctatcatcaaa gaaactgcttcctcggatacccatttgatgctttatgatggccgtagaaggtcgagcgat atcgagaatagtttagtgtacgtcccctacaagcgtgaattcttttttgttactaacatt gtgaggaggaagaatggatacagccaatacaaggactcaggctccttgagtcattttgag catttaaagaccaggtttggcattcatcttaaataccctgagcagcctcttctttgtgca aaacccctattcagtttgcacaacttgctacataatagaaagcagaaagattctgaagca ccttatctggaagaatattttatcgatgtcgctcccgagctttgtcaattgaagataact ggattttcgaaagacatcgggagctctatatctttgttgccatcaattatgcatcgtcta gaaaatttgcttgttgctattgaattgaagtgtatgctagcggctgcttttccagcggga gctgaggttactgctaacagaattctagaagctctcaccactgagaagtgccaggaacga ttttccctggaaaggcttgaaatacttggtgactctttccttaaatttgccgtagcaagg tacctttttctcgcccacgataagttcgatgaaggagaacttacaagaagacgttcttat ttggtgaaaaatatcaatttgttcaagctagcaactagaaagaatttacaggtatacata cgtgaccagccatttgaacctagccaattttatttacttggtcgtccttgcccaagaatt tgtaatgaggaaacacgaaacgatatccattctcacgataatgcaacaaataatgcaaaa tttagtgagaccaagtgcagcaaaggccatcactggttacaaaagaaaacgatcagcgat atggtcgaagctctgataggagcattcctagtcgacagtggcttcaaagctgcaattgca tttctcaaatggatcggcataaaagtagaattcgaagcttcgcaggttaccaatgctctc gtggcaagcaaggcttacgtcctatttgcagatactataaacatttctgcacttcaaagt tcattaggccataaatttctccataaaggtctgttgctgcaggcgctcgtacatccgact taccacaagcacggaggaggttgttaccagagattagagtttcttggggatgccgtcctg gattacttgatcatgtcgtatctatattcagtatatcctaaactgaagccgggcctattg acggatttgagatcagtgtttgtgaggaacgaagcttttgccaacgttgcggttgatcga ttcttctacaagtttctgctttgtgattctgctagccttgaaagtgatataaaaagttat gtagactttatcaaagcacctccttcggaaagagattcgctcgagcagccgagatgtcca aagcctttgggagacttggtggaatctagtgttggggccgttcttgttgatacagggttt gatatgaactatgtctggaagataatgttatcatttctggatcctatcatgagctcttca ggcttccagcttagtcctattcgcgacataatcgaagtttgtcaaaattgtggctggaaa cttcagtttaatccatcgaaaatggaaaaatattattcggttgaagcagaggtgaaaggg gacgactttcatgccacggcttctgctgtcaaccgtcgaaagaaagacgccgagaaaatc gctgccaacgctatactcaggaagttgaaggcccaaggattcatacctgaggtcaattca ttagagaagattttaaagtcgagcgagaagatgaaacctaaattgattggttatgatgaa acaccctcggtcacgatggatcgaatcgacgatggcttagaattttctggtgcagactta gatcctcttgtgcaccgtgaagttgggaattctcgtccatttcgtattacacggatgagt gaaacgctggcttcttcatctggagctgcaggagaacagttgaagcctagcatccccctt gaaggtcatgatagttcaacagacttgctgtcatcgtcatcgtcatcgtcgtcgtcgtcg tcgtcatcatcgtcatcgtcaggtcggtcggggaaaactacggcaagatctcgtctgtat gaagtttgtgccataaaccattggaatcacccttcatttaactgcatgaatgaggaagga ccaagccatttaaagatgttcacatacaaggttgtgttggagatagaagaagcccccgat acgattttcgagttcttcggagcaccacatttgacgaagaaggcggcagcggagcatgca gcagaagcagctctttggtacttgaagaaggaaaggtacttgggtgacacagattga

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