Cucurbita maxima (winter squash): 111485537
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Entry
111485537 CDS
T05246
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111485537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111485537
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111485537
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111485537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
Motif
Other DBs
NCBI-GeneID:
111485537
NCBI-ProteinID:
XP_022988236
UniProt:
A0A6J1JGN9
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLSVLNHVRRQQDIRATEIDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELDVVS
AESTAGSVMVPISWTEMQCPLTAQIQQRKVAKVGG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgtcttaaatcatgtccgtaggcaacaagacattcgagcaacggagattgat
aaagtagatatgcatttgtcatttcgtcctggtgacattgtcaaagctcttgttctttct
cttggagatgcaagggcctatcatctatcaactgcaaaaaacgaactcgacgtcgtctct
gccgaaagtacagcaggttcagtgatggtacccataagttggacagaaatgcagtgtcca
ttaacagcccaaattcagcaaagaaaagttgccaaagttggaggatga
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