KEGG   Cucurbita maxima (winter squash): 111486098
Entry
111486098         CDS       T05246                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111486098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111486098
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111486098
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     111486098
SSDB
Motif
Pfam: RNase_PH RNase_PH_C BAG6
Other DBs
NCBI-GeneID: 111486098
NCBI-ProteinID: XP_022988876
UniProt: A0A6J1JIH0
LinkDB
Position
Unknown
AA seq 286 aa
MKGLSVGEKLFIEGGIAQDLRTDGRRRLTYRPISVETDVISQANGSARVRMGGTEVIATV
KAELGRPNAMQPDKGKVSIFVDCSPTAEPTFEGRGGEELATELSVSLERCLLGGKSGAGA
GIDLSSLIVVEGKLCWDLYIEGLVVSSDGNLLDALGAAIKAALSNTGIPKVNVSAEASAN
EQPEVDVSDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAISISVNRHCHVC
GLTKRGGAGVDPSVILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
NT seq 861 nt   +upstreamnt  +downstreamnt
atgaaggggctttcggttggagaaaagcttttcatagaaggtggtattgctcaggatctt
cgtaccgatggtcgaaggagactaacttatcgacccatttccgtagaaacggatgtgatc
tctcaggcgaatggttcagcaagggtcagaatgggtggtaccgaggttattgctactgtc
aaggctgaacttggaaggcccaatgcaatgcagcctgataaagggaaggtttccatattt
gttgattgcagcccgactgcagagccaacgtttgagggtaggggtggtgaagagttggca
acagaactctcggtttcccttgagcgatgcctcttagggggaaaaagtggtgcaggggct
gggattgacctttcgtctctgatagttgtggaagggaagctttgctgggatctttatatt
gagggccttgttgtaagctcagacggaaatcttctagatgcccttggtgctgcgattaag
gctgctttgagcaatacaggcataccaaaagtcaatgtttctgcagaagcatcggccaat
gaacaacccgaagttgacgtaagcgacgaagaatttctacagttcgacacgtctggggtt
ccggtcatagttacgttgacaaaggtgggtaggcactacattgtggatgctactttggaa
gaggaatctcaaatgagctctgcaatctccatatctgtcaacaggcactgtcatgtctgt
gggttgaccaaacgagggggtgctggggtcgatccaagcgtaatccttgacatgatatcc
gtgggcaaacatgtgagcgagcaattattaaacaagttggattcggagatagctgctgct
gaagctgatgaagaagaatga

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