Cucurbita maxima (winter squash): 111486240
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Entry
111486240 CDS
T05246
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
cmax03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111486240
03083 Polycomb repressive complex
111486240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111486240
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111486240
Histone modification proteins
HAT complexes
HATB complex
111486240
HDAC complexes
Sin3A-HDAC complex
111486240
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111486240
PRC2.2
111486240
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111486240
Heterochromatin formation proteins
Other heterochromatin formation proteins
111486240
Chromatin remodeling factors
NuRD complex
111486240
NuRF complex
111486240
NuRF complex (fruit fly)
111486240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
AftA_N
Motif
Other DBs
NCBI-GeneID:
111486240
NCBI-ProteinID:
XP_022989054
UniProt:
A0A6J1JNA2
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
HKLVLGTHTSEDVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
RCMPQNPEIVGAKTSGCEVYVFNCAKQGAKAQGGECDPDLRLRGHDKEGYGLSWSPFKEG
YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK
ISDFSWNAHQPWVIASVAEDNSVQVWQMAKGIYRG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagaacagaacggcggtgtcgatgaggtgatggaggaattcgccatctggaag
aagaattctccctatctgtatgatcttctcatttcccactctctggagtggccgtctctc
accgttgattgggtgccattggctccatttcctcacccagccaattcttctctcgctgtc
cacaagctcgttcttggaactcacacttcggaggatgtccccaactttctcatggtggcc
gatgtaattttacctgtcaaagcatccgaaactagaatcgacattactggggaaaacccc
atcatgccggaggtagagataacccagaagatacgtgttgatggagaggtgaacagagcg
cgatgcatgccgcagaacccagaaattgttggggcaaaaacgagtggctgtgaggtgtat
gtttttaattgtgctaaacagggggcgaaggctcagggaggtgagtgcgatcctgatttg
agattgaggggtcatgataaagagggttatgggttgtcttggagcccgtttaaggagggt
tacctcttaagtggctcaaatgatcagaaaatctgtttgtgggacgtgtcttccatggct
gacaagaacgttcttgatgcaatgaacgtctatgaggctcatgaaagtgtggtcggtgat
gtgtcatggcatttgaagaatgagaacttgtttggatctgtaggcgatgattgcttgttg
gtgatatgggatttgcgcacaaataaatctgtggattctgttcgagctcacgaggaggag
gtgaactatgtttctttcaatccatataacgaatggattttagcaacagcatcatcagat
accaccgtgggtctcttcgatctacgaaagcttgccgaaccactccacgttcttagcagc
cacacggagggagtgtatgaggtggagtgggatccaaatcacgaaactgtattagcatct
tctggtgatgatagaaggttgatggtatgggatctcaacaacatgggaaacgagcaagat
ggggatgctgaagatgggcctccagagctgctgttttcacacggaggccacaaggctaaa
atctctgacttctcctggaacgcccaccagccttgggttatagcaagcgtcgctgaagac
aactctgttcaggtctggcaaatggccaaaggtatttatcgaggatga
DBGET
integrated database retrieval system
