Cucurbita maxima (winter squash): 111486260
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Entry
111486260 CDS
T05246
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmax01009
]
111486260
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111486260
03041 Spliceosome [BR:
cmax03041
]
111486260
Protein phosphatases and associated proteins [BR:
cmax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111486260
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111486260
Spliceosome [BR:
cmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111486260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
PHM7_cyt
RRM_PARP14_3
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
111486260
NCBI-ProteinID:
XP_022989082
UniProt:
A0A6J1JET1
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY
GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR
IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS
TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPPLNIGMPRQRCRDFEERGFCL
RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL
LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE
VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDT
VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHMAQDDARTKAGDSSLKAHSDAMHTLRKPS
QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS
PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK
GGISHPLESSLAAPDNSHAFNSPKKPPLQKKLENLEQLKEQLRKKQDMLDMKRNDFRRQL
DKLEKQTSGSKADAITGFSAKRLKVGVEADSSKLVSPKASESSIPLASPHTEVNGENVEH
TTCTVQEESSKFEPVHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGNVRTIELV
SENCSSISNASNTYSANVTFLTRHSAERAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS
RDVDMEPKKESEIILFIETLRDRESENSTRDSCVEPSETGKVSPVIERDMN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaagtttcatatcctaagccagacatttcttcctctgagtatgttagtgat
ccggaggaaaaggatattagtgatgatgaagatgatgatcgcaaccataagcataggagg
cgggagacacactctcagtctttggaaacggatacacgtgaacatgatttgaggccatat
ggaaagcgcagtaaaccttttgaaaatggacgtagttttagggacaacgattctcaagcg
aatgaagcttggaaatccttcaattcttccactcttgagaaagacatccctgggaaattt
gataaaagacgcctaggtggagtgccaggttctcgagtggctggggatttcaatcaaagg
atcagggcaaaccaggcgttttctagtgacctaagttttggtaggggaagaggcagggag
tctgccccttggaaccagtttgattcaaggtttagtcctgttgatattgcttcccaaatt
gttcaccatgggccttttcctcctaggctatttgctggaaggggtttaccaagtgtttct
acttcacaaactgcaccatggaatacatttggattgataccaggaattccgaatggtggg
ctagaaccgatgcactctattggttttcagggaacacttaggcctccgatcaaccctcct
ctgaacattggcatgcctcgtcagagatgtagagattttgaggaacgaggattctgtctt
agaggagacatgtgtccaatggagcatggaactaatcgcattgtagttgaggatgtccag
agtctttctcaatttaatcttccgctgtcgcttccaaatgcacaattaatggggaaaact
actggatctctgccaacagttagcacatcttccacgacagtaatgtgtggcaaagggtta
cttggaaaaaataccaagcctggtgtaggagatgattcattggccttccatggtgtatat
tcaggttctggtaatgcagctgaagctgacttgtacgatcctgatcaacctctatggaac
aacaactgtcctgagaaacaaaatgcactctcgggtatgcattcatcaaagattgatgaa
gttgaaaccttggtaggagatgatccttctgataggaatcaggttaggaaatgtgatgct
gctgataatggatgcactagtagaattactgtaactagtggtcaacaggttactagttcg
tttgccgggggtagaggtgggtctagaaatagacatgatatgaaaggtaaacttgataca
gttgtaagttcctctggctatcatgagaatgaagtgaaggaacacaatgaagttttgact
agtgtccaaggaaattcccatcaagaaaagcacatggctcaggatgatgctcgcacgaaa
gctggagattcatctctcaaggcacatagtgatgccatgcatactttgcggaaaccttct
cagaaagcaatgcgtactttatttgtcaatgggattccacaacagagtaacaatacagag
gcacttctttctcattttaaaaaatatggtgaggtcattgacatctatattccagcaaat
agccaacgagcttttgtccagttctcaaaaagggaagaggcagaagctgctctaaagtca
cctgatgctgttatgggcaatcgttttatcaaactttggtgggctaatcgtgacagcatt
cctgatgatggtgtaagcagtaataatggtattcatgtacttccacatcatattgcagct
gcttcacttccttctattgctgtcaaaggaaagaactgtgtccaggtttccacttcaaaa
ggcggcatttcccatccattggaatcttctttagctgctccagataactctcatgctttc
aatagcccgaagaaacctcctttgcaaaagaaattagagaatctggaacagttaaaggag
caactccggaagaagcaagatatgctagacatgaagcggaatgattttagacgccagtta
gataaacttgaaaaacagacctcaggaagcaaagccgatgcaatcactgggttctctgca
aagcggcttaaagtgggagtagaagctgactctagtaagcttgtttctccaaaagccagc
gaatcaagtattcctttggcgtcaccacatactgaagttaatggggagaatgttgagcac
accacatgtactgtacaagaggaatcctcaaagtttgagcctgttcatcccttggcaccc
gaagcaccttttgacattggatttagaattcttcctcctttaccagccgaatttgccaat
gagaatgtgataaaggagcatttctcagccttcggtaacgttcgtaccatcgaacttgtt
tcggaaaattgcagcagcatttcaaatgcatccaatacctactcggctaatgtcaccttt
ttaacccgccattcagctgaacgggcatttgaaaatggcaaatgtaggcaaggtcaagac
ctgaaatttgtatggctatctagtggcaaagaccctgatgacaagtcttcggaggcatct
cgagatgtcgacatggagcctaaaaaggaatcagaaatcatcctctttatagaaacctta
agagacagagaatccgagaattcaacacgagacagttgtgtcgagccttcagaaacaggt
aaagtttccccagtgattgaaagagacatgaattga
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