Cucurbita maxima (winter squash): 111486364
Help
Entry
111486364 CDS
T05246
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111486364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111486364
03016 Transfer RNA biogenesis [BR:
cmax03016
]
111486364
Enzymes [BR:
cmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
111486364
Messenger RNA biogenesis [BR:
cmax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
111486364
Transfer RNA biogenesis [BR:
cmax03016
]
Prokaryotic type
tRNA degradation factors
111486364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
Urease_gamma
S1_RRP5
KH-I_KHDC4-BBP
PCB_OB
Motif
Other DBs
NCBI-GeneID:
111486364
NCBI-ProteinID:
XP_022989223
UniProt:
A0A6J1JPN1
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MASKAHPLFSAIPHFLTWRSLSFRTVCCGRMGFASQSQQQRDPTDAISGRTKVLESFKEE
FEIGSRLITLETGKIARFANGAAVLGMEETKVLSTVTSAKGDAVCSDFLPLTVDYQEKQF
AQGVIPSTFMRREGAPKERELLCGRIIDRPIRPLFPSGFYHEVQVMASVLSSDGKQDPGV
MAANATSAALMLSDIPWGGPIGVIRIGRVDGQFVVNPTMDELNLSDLNLVYACTREKTLM
IDVQACEITEKDLEAGLRLAHPEAVKFLEPQIRLAAKAGKLKKEYKLSMLSDSTMEKVTK
LAEAPIEAVFTDHSYGKFERGEALDKITKDVEKVFEEECDEEGLKVLPKAVDRVRKKVVR
RRIIAEGLRVDGRRLDEVRPLYCESRYLPILHGSSIFSRGDTQVLCTVTLGAPGEAQRLD
SLVGPPTKRFMLHYSFPPFSINEVGKRGGLNRREVGHGTLAEKALLAVLPSEDEFPYTVR
VTSEVMASDGSTSMATVCGGSMALMDAGIPINAHVAGVSVGLVSETDPTTGAIIDYRILT
DILGLEDHLGDMDFKIAGTRKGITAIQLDIKPAGIPLDIICESLEHARKGRLQILEHMES
EINAPRIKDDANSPRLVILKYTNDALRRLIGPLGASKKKIEEETGARISVGDGTLTILAK
NQAVMEKVQEKVDFTLGREIEIGGMYKGVVTSVKEYGAFVEFNGGQQGLLHISELSHDPV
SRVSDVVSVGQRISLVCIGQDVRGNIKLSLKATMPRPKAEAQNGNSVPSLDPVSPVGEVP
KTWHETPNSTSNTSPVDTSVGSEVNRTSSIPSILIRSAEDCDEEDKKSADMNVKLKDTRK
SNANSRSERKSKPLAQNGPSNNEVDVESPINARNLKLGVRVRAKVYQIRARGLVLDLGEG
LRGMYKFEGDNRSNFEVGDELHVQCSSFSSKGIPVMSLVANE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaagcgcatccccttttctccgccattccacacttcctaacttggcggagc
ctcagctttcgcaccgtttgttgcggccgcatgggcttcgcttctcaatctcaacagcag
cgtgatcccaccgatgcaatctcaggccggaccaaggttctcgaatctttcaaagaagaa
ttcgagattggatcgcgcttgattacgttggaaactgggaagatcgctcggtttgctaat
ggcgccgcggttttgggcatggaggagactaaggttttgtccaccgttacctctgctaag
ggggacgctgtttgttctgattttttgcctctcacggtggattatcaagagaagcaattt
gcacaaggtgttattccaagtacattcatgaggagagagggggctcctaaagagcgtgaa
cttttatgtggtcgcattatagatcgtccgattaggccattatttcccagtggattttac
catgaggtccaggtaatggccagcgttctttcttccgatggtaaacaagatccaggtgtt
atggcagctaatgcaacatctgctgcccttatgttatcagatataccctggggtggcccc
ataggcgtgattcgtattggaagagttgatgggcagtttgttgtcaacccgactatggat
gagcttaacttgagcgatctcaacttagtatatgcctgtacaagggagaaaactttgatg
attgatgttcaagcatgtgaaatcactgaaaaagatcttgaagctggattgaggttggca
catcctgaagcagttaagtttcttgaacctcaaatcagactggctgctaaagctggaaag
ctgaagaaagaatacaagttgtccatgttatcggatagtacgatggaaaaagttaccaag
ttagccgaagcccctattgaagctgttttcactgaccactcttatggcaagtttgaacgt
ggagaagccttagataagatcacaaaagatgtagagaaagtgtttgaagaagaatgcgat
gaagaaggcttgaaggttttgccaaaagcagtagacagagtcaggaaaaaggttgttcgc
agaaggattattgctgaaggacttagagttgatggtcgacgtcttgatgaagttaggcca
ttgtattgtgaatccagatatttacctatacttcatgggtcatcaattttttctcgagga
gatacacaggttctatgtactgtaacacttggagcaccaggagaagctcagcgcttggat
tccctagttggtccaccaactaaacgttttatgcttcattatagcttccccccgttttca
ataaatgaagtggggaaacgaggtggtttaaataggcgtgaagttggccatggaaccctt
gccgagaaagctttgctcgctgtgttaccttctgaagatgaatttccatatactgttcgt
gtaacttcagaagtcatggcctcagatggttcaacgtcaatggcaactgtttgtggaggt
agcatggcattgatggatgctggcattccgataaatgcacatgtggctggtgtttcagtg
ggtcttgtcagtgaaactgatccaacaactggtgcaattatagattaccgtatcttgact
gatatactaggacttgaagatcatctgggggatatggacttcaaaatagctggcacacga
aaaggaattacagcaattcagttggacataaaacctgctggaattccattggacataata
tgtgagtccctagagcatgcacgcaaaggtcgcctgcaaatactagagcacatggagagt
gagattaatgcaccacgtattaaggatgatgcaaactctcctcgattagttatcttaaag
tacactaatgatgctcttcgtcgcttaattggacctcttggtgcttcgaagaaaaaaatt
gaagaggaaacaggtgcacgcatatctgttggtgatggaactcttaccatattggctaaa
aatcaagctgtgatggaaaaagtacaagaaaaggttgatttcacacttgggcgtgagatt
gaaattggagggatgtataaaggagttgtaacttcagtgaaagagtatggtgcatttgtt
gagtttaatggtggccagcaaggccttctccacatctcagagttgtcacatgatccagtc
tcccgagtttcagatgttgtatctgttggtcagaggatttccttggtgtgcataggtcaa
gatgttcgtggtaatatcaaattgtccctcaaagcaactatgccccgaccaaaagctgaa
gctcagaatggaaattctgttccttctttagatccagtttctccggtcggagaagtacct
aagacgtggcacgaaactccgaattctacatccaatacttctcctgtggacacaagtgta
ggtagtgaggtaaatcgtacttcatcaattccatctatccttattcggagtgctgaagat
tgtgatgaggaggacaaaaaatccgctgatatgaacgtgaaacttaaggatactcgaaaa
tcgaatgccaattctagatcagaacgcaagtcgaaacccttggctcagaatggtccaagt
aacaacgaagttgatgttgagagccccataaacgcgagaaatctgaaacttggagtgcga
gtcagggcaaaggtttatcagattcgagctcgtggtttagttcttgatttgggtgaagga
cttcgtgggatgtataaattcgagggagacaacaggagcaatttcgaagttggggatgag
ttacacgttcagtgttcgagcttttcgagcaagggaattcctgtaatgtcattggtcgct
aacgagtag
DBGET
integrated database retrieval system
