Cucurbita maxima (winter squash): 111486872
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Entry
111486872 CDS
T05246
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111486872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmax04121
]
111486872
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111486872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
F-box_4
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
111486872
NCBI-ProteinID:
XP_022989791
UniProt:
A0A6J1JRD0
LinkDB
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Position
Unknown
AA seq
338 aa
AA seq
DB search
MDGGVIAGWKDIPMELLLQIISLVDDRTVIVASGVCRGWRDAICFGLLHLSLSWCKKNMN
NLVLSLVPKFAKLQTLILRQDKPQLADEAVDTIASYCCDLQVLDLRKSFKLSDRSLYALA
HGCRDLKKLNISGCTSFSDTALAYLASYCRKLKVLNLCGCVKATSDTALQVIGQYCNHLQ
SVNLGWCENVSDVGVMSLAYGCPDLRSLDLCGCVLITDNSVIALANMCPHLRSLGLYYCQ
NITDRAMYSLAHSIKNKPTKWAPGKCKNDHDGLRTLNISQCTALTPPAVQAVCDSFPALH
TCPGRHSLIMSGCLNLMSVHCACAVQAHRTAAFHHPAH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggacggtggggtgatagccggatggaaggacattcctatggagcttctcttgcaaatt
atatctcttgttgatgatcgaactgttattgtggcttcaggcgtgtgtcgtggatggagg
gacgctatttgctttggactcctccatctctctctctcatggtgcaagaagaacatgaac
aacttggtcctatcccttgtccctaaatttgcaaaactgcaaaccttaatcttgcgccaa
gataaaccccagcttgcagatgaggctgttgataccattgctagttactgctgcgatctg
caggtcctggacctgagaaaaagtttcaagctcagtgatcgttccttgtatgctctggct
catggttgccgtgatcttaaaaagcttaatattagtggctgtacttcatttagtgacact
gcattggcttatctagccagttactgcagaaagctaaaagttcttaatctttgtggctgc
gtcaaggctacatcggacactgcattgcaggttatcgggcaatactgtaatcatttgcag
tctgtaaatctaggatggtgtgagaatgtgagtgatgtgggtgtgatgagtttggcgtat
ggatgtcctgatctcagaagcttagatttgtgtggctgtgtcctaattacagataatagt
gtgattgctttggcaaatatgtgccctcatctgaggtcccttggcctctactactgtcag
aacataacagacagagctatgtactctttggcccatagcataaagaacaagcctacaaaa
tgggcacctgggaaatgcaagaacgatcacgatggacttcgaacacttaacattagtcaa
tgcacagctcttaccccccctgctgttcaggcagtttgtgattcgtttccagcgcttcac
acctgcccgggtcgacattctctcatcatgagtggctgtctaaatttgatgtctgtgcat
tgtgcttgtgcagtccaagctcaccgcactgctgcttttcatcatccggctcattga
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