Cucurbita maxima (winter squash): 111487024
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Entry
111487024 CDS
T05246
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03030
DNA replication
cmax03410
Base excision repair
cmax03420
Nucleotide excision repair
cmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111487024
03410 Base excision repair
111487024
03420 Nucleotide excision repair
111487024
03430 Mismatch repair
111487024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmax03032
]
111487024
03036 Chromosome and associated proteins [BR:
cmax03036
]
111487024
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111487024
DNA replication proteins [BR:
cmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111487024
DNA Replication Termination Factors
ELG1-RFC complex
111487024
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111487024
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111487024
Check point factors
HRAD17(Rad24)-RFC complex
111487024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_16
AAA_assoc_2
RCF1-5-like_lid
AAA_11
AAA_14
DUF815
AAA_5
AAA_30
RuvB_N
AAA_7
ATPase_2
AAA_24
bpMoxR
AAA_3
ResIII
nSTAND3
AAA_19
DNAX_ATPase_lid
AAA_25
SLFN-g3_helicase
AAA_28
AAA_35
AAA_18
TIP49
Mg_chelatase
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
111487024
NCBI-ProteinID:
XP_022989996
UniProt:
A0A6J1JLQ5
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MSEVITVIDIDDDNDNNEAEKRVKCSNVASPAAVPDGKAIPWVEKFRPKSLADVAAHRDI
VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGANYHKMILELNASDDRGIDVV
RQQIQNFVSTQSFSFGVKPSVKLVLLDEADAMTKDAQFALRRVVEKYTKGTRFTLICNHV
NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVSESGLAALVRLCGGDMRKALN
IMQSTHMASQHITDEAVYICTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV
DIVREVTMFVFKIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGLLISSFTKARCALVS
AAE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagtaattactgtcattgatatcgacgacgacaatgacaacaacgaagctgaa
aagcgagtcaagtgcagcaatgtcgctagtcctgccgccgtacctgacggcaaagcgata
ccctgggtcgagaagtttcggccaaagtctcttgccgatgttgctgctcaccgcgacatt
gttgacaccattgacaagctgaccagtgagaataggctgccacatctcctgttgtacggc
cctcctggcactgggaagacatcaaccattctagcagttgcccgcaagctttatggagca
aactaccacaagatgatactcgagctgaacgcatcagatgatagagggatagatgttgtc
cgacagcagattcagaattttgtcagtactcaaagcttttcatttggggttaaaccatct
gtaaaattggtacttctggacgaggcagatgccatgactaaagatgcacagtttgcttta
cgtagagtagttgagaaatatacaaaaggtacaaggtttactcttatctgtaatcacgta
aataagattattcccgctttacaatcaagatgtacccgcttccgatttgctcccctcgac
aactttcatgtcactgaacgactcagatatgttattgaggctgagaggttggacgtctct
gagagtggcttagcagcccttgttcgactttgtggtggtgatatgagaaaggctttaaat
attatgcagtcaacgcatatggcttctcagcatattactgacgaggctgtatacatatgt
acaggaaatccaatgcccaaagacatagaacaaatatcattttggctgctgaatgaacca
ttttctgacagttttaagagaatatctgaaataaagaccagaaaaggattagctttggtt
gatatagtgagagaagtcaccatgtttgtttttaagatcaagatgccatcggatgtaaga
gttcaattgattaatgatcttgctgacatagagtacagaatgagttttggatgcaacgac
aagttacaactcggattgctcatctcatcgtttactaaagccagatgtgcactcgttagc
gctgcagagtag
DBGET
integrated database retrieval system
