Cucurbita maxima (winter squash): 111487162
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Entry
111487162 CDS
T05246
Name
(RefSeq) protein RNA-directed DNA methylation 3-like
Organism
cmax
Cucurbita maxima (winter squash)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
Spt5-NGN
KOW4_SPT5
KOW
KOW5_SPT5
KOWx_SPT5
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
111487162
NCBI-ProteinID:
XP_022990198
UniProt:
A0A6J1JSK2
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
MASKGKGIAKDTSSGKRKLRDDTDSSAARKRMDRSVLQFFEDVSPELGAYSDDSDFLDDF
MEEEFEPVPAFKNDDSKAQNIPFFPKEEEMNEEEFDRMMEEHYSRGPGLGAFAEENYENK
ISTGRNPPQQSARDIISLWKVKCMVGRERQSVFCLMQKFVDLHSFGTKLQIKSAFCVEHI
KGFIYIEAPRQYDLIEACKGINGIYSTRIASVPENDISQLLTVQSRVSEVAVGTMARVKN
GKYKGDLAQIVAVNNARKRATVKLIPRIDLQSMAEKFGGGVVAKKVTNPAPRLINSSELE
EFRPLMQFRRDRETGKLFEFLDGMMLKDGYLYKKVSLDSLNCWGVMPSEDELLKFKPPES
IEANDLEWLSQLYGEKKKKKIIRTEKGGGKGEGSSGSSSMISFGDHDLVCFGRKDFGMIL
GTEKDDSYKILKDGLDGSVVVNVQRKELKSGPLDAKFTSVDHNGKIISVSDNVKVLEGSL
KDKQGIVKHVYRHTVFVYDENEVDNDGYFSCKSNLCAKIKISYDAPSGKEDDKGFSGFED
FSSSPKSPLSPKKPWAEKEGREYNRDDRGDGMFSIGQTLRIRVGPLKGYLCRVIAVRKRD
VTVKLDSRQKVLTVRFDLLTEVHRKSSAVSVSEDPEFSSLKPFDILGNEGSSQDWMGGTG
SSAAGDGWNSAGASSERSPWPSFPESGTLNCPGSSSTNPFGSENLDAKKDVEDSPWVSKS
TAEANTSWGTANSSVDTANDDQACGWGKSESWDKATAKTISDGNVSGAWGKSIVPSGDSA
GDKWDKGKHVTSDNQTGKWGGGTSGKNELSEWSRDKDSESGGWKKNPSVSVGDNNTPSET
SADKWGSKNRSNGSWGHQNVSTTVSEIQTAGKDNVGGWTKPGAENKINPSGWNEDTSMKG
GQTSNWGNQDEAGGWGKPMNVGDGGSSAWNKTTACGDGNDSWKKSNESEREGGNRSWNSK
SSDGDSAIWKDKSHSSRLTASKGDQWGGGWNKQHSSNETKASEDNSPWNKKSVESGKDNE
LENQGSGWNVGKTSGDSASGWGQTSKEAGSSDQGSSWGSNWKKKSDTGNEDSSSAKKSNW
SSGSGNLNWGEKSNWNSGNEFNAYHSNNGAEAQTEVSNDWRGESSDRGGFRGIGSFRGRG
ERGRFGGRGRSDRGGFGRGGSDRGGFGGRGRGRWNSEGGSNDGDNKGWSSGGGDWEKSSS
DRGGFGVRGRGRWNRESGSNDGENRGWSSGGGDRERSGSDRGGFRGRGRGRWNQEGGSRD
GDNGGGWSGGRGGYGGRGRGRWNQESGSNDGGDSGGRGGGSWEKSQSDRGGFGGRGRGRW
NREGDTNDCDNGGGWSSGGNWGKSGSDRGGFGGGGSGKWSQEGGSNNSDYGGWSGGGGGS
WGKSGSDRGGFGGRGRGRRNQDGGSNDDDNVDKPASWSTGSGNNGEWGSGDGTAGSWIGG
GDDKNQQQSWKSSNDAGEGSGWKAPSGNENINWKASGSSGVNDNSGWNKSTACKEIEESG
DQKNSWGKAAKADTHTQGGGWQKSASGWNEGTDNQSSMKDVNAVASDGGWNDQSENQAKY
WKSSEASGEGQSSVWKPSTWTTDKEADSSQKGNWNKEANAGAQGGGGGWDKPTSSNDAAG
WGKSSYADDGKSLSGWGR
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagggcaaggggattgccaaagacacctcctccggtaaacggaagcttcgc
gatgacaccgatagctccgctgctcgcaagaggatggaccgtagcgtactccagttcttc
gaagatgtttctcccgaactcggtgcctatagcgacgacagtgattttcttgatgatttc
atggaggaagagtttgagccagtaccggcatttaagaatgatgattcaaaagctcaaaat
atcccatttttccccaaagaagaggaaatgaatgaggaagaatttgatagaatgatggag
gaacattacagtcgaggtcctggacttggtgcatttgcagaagaaaattatgaaaacaaa
atttccactggaagaaaccctcctcagcaatctgccagggatattatctctctgtggaag
gttaaatgcatggttgggcgtgagcggcaatcagttttttgtctcatgcagaaatttgtt
gatttgcactcgtttggtaccaagttacagataaaatctgcattttgtgtggagcatata
aaaggttttatttacatagaagctccaaggcagtatgatttaattgaggcatgtaaaggc
ataaatggaatatattctacccgtatagcttctgttcctgaaaatgacatctctcagttg
cttactgttcaaagtagagtcagtgaagttgctgtgggtacaatggcccgtgtaaaaaat
ggaaaatacaagggagaccttgctcagattgttgctgtcaacaatgcacgcaagagagca
acagtgaagctgattccgagaattgatcttcaatctatggctgaaaaatttggtggagga
gtcgttgctaaaaaagttaccaatcctgcaccacgattgatcaactctagcgaacttgag
gaatttcgaccactcatgcaatttaggcgtgaccgtgaaactgggaagctttttgaattt
cttgatgggatgatgctcaaggatggatatctatacaaaaaagtatctttagattcatta
aactgctggggtgtgatgccatctgaagatgagctcttaaagttcaagcctcctgagagc
atcgaagctaatgatcttgagtggctttctcaactttatggtgaaaagaagaaaaagaag
attattaggactgaaaaggggggtggtaaaggagagggctcatcagggtctagttccatg
atcagctttggagatcatgatcttgtttgttttggccggaaagattttgggatgatatta
gggacggaaaaagatgatagttacaagattttgaaggatggccttgatggatctgttgtg
gtgaatgtgcaacggaaagagttgaaaagtgggcctttagatgctaaatttacttctgtt
gatcacaatggaaagatcatctctgtttcagacaatgtcaaggttttggaaggttcattg
aaggataagcaagggattgttaagcatgtatacaggcacacggtgtttgtatatgatgag
aatgaggtggacaacgatggttatttctcctgcaaatctaacttgtgtgcgaaaatcaag
atttcttatgatgcacctagtggaaaggaggatgacaagggtttctctggttttgaggat
ttctcctcttcgcccaaatcacctctatcccctaaaaagccatgggcagagaaggaaggc
cgtgagtacaaccgtgatgatagaggagatggaatgttctccattggtcaaaccttgaga
atacgtgttggtcctttaaagggatacctatgtcgtgttatagctgtgcgtaaaagagat
gttacggtgaagcttgattcccgacagaaggttcttacagtcagatttgatcttcttacg
gaggtacatagaaagagctctgccgtgtctgttagtgaggatcctgaattttcttctcta
aaaccatttgatatactgggaaatgaaggcagctcccaagattggatgggtggtacgggg
tcatctgcagctggtgatggctggaattctgccggggcttcttcagaaagaagtccatgg
cccagtttccccgagtctggtaccttgaattgtcctgggtccagttccacgaatcctttt
ggttcagaaaatcttgatgctaaaaaagatgttgaagactctccttgggttagcaagtcg
actgcagaagcaaacacttcctggggtactgcaaattcgagtgttgatactgctaatgat
gatcaagcctgtggatggggtaagagcgagtcatgggacaaagctactgctaaaactatt
tcagatggtaacgtttctggtgcctggggcaaatcaatagtacctagtggagattctgct
ggcgacaagtgggacaaagggaagcatgtaacttctgataatcagactggaaagtggggc
ggtggaacctctggaaagaatgaactcagtgaatggagcagagataaagattcagaatct
ggggggtggaaaaagaatccaagtgttagtgttggtgataacaatactccatcagaaacc
tcagctgataagtggggcagcaaaaatagatcaaatggaagctggggtcaccagaatgtt
tcaaccactgtctctgagattcagacagctggcaaagacaatgtaggtggctggaccaaa
ccaggagcagaaaataagatcaatccaagtggttggaatgaagacacttcaatgaaggga
ggtcaaacatcaaactggggcaaccaggacgaggcaggtggttggggtaagccaatgaat
gtgggtgatggtggcagttctgcttggaataaaactaccgcttgtggagatggaaatgac
agttggaaaaaatctaatgaatcagaacgtgagggtggaaatagaagttggaattccaag
tcatctgatggggattcagctatttggaaagataaatctcattcctcaagattgacagct
tccaaaggagatcagtgggggggaggttggaataagcagcacagttctaatgagacgaaa
gcttctgaggacaattcaccatggaataagaaatctgttgaaagtggaaaagataacgag
ctggagaatcaaggcagtggttggaatgttggaaaaacttctggagattctgcatctggg
tggggtcagaccagcaaggaagccggctcaagcgaccaagggagtagctggggttctaat
tggaaaaaaaaatctgatactggaaatgaggattctagttcggctaagaaaagcaactgg
agttctggtagtggcaatttgaactggggcgagaaaagtaactggaactcaggaaatgaa
tttaatgcttatcattccaacaatggtgctgaagctcagactgaagtttccaatgattgg
agaggagaaagtagtgatagaggaggctttagaggtataggttctttcagaggaaggggt
gaaaggggtcggtttggtggtagaggcagatctgatagaggtggatttggtagaggtgga
tcagacagaggaggatttggaggcagaggccgtgggagatggaacagtgaaggtggttca
aatgatggggacaataaagggtggagtagtggtggtggtgactgggagaaatctagttca
gatcgaggtggatttggtgtcagaggccgtggaagatggaacagagaaagtggttcaaat
gatggtgagaatagagggtggagtagtggtggtggtgacagggagagatctggatcagac
agaggtggttttagaggccgaggtcgtggaagatggaaccaggaaggcggttcacgtgat
ggtgacaatggaggagggtggagtggtggtagaggcggatatggaggcagaggccgtgga
agatggaatcaagaaagtggttcaaatgatggtggtgacagtggagggcggggtggtggc
agctgggagaagtctcaatctgacagaggtggatttggaggccgaggccgtggaagatgg
aatcgagaaggtgatacaaatgattgcgacaatggaggaggttggagtagtggtggtaac
tgggggaagtctggatcagacagagggggatttggaggcggaggctctggaaaatggagc
caagaaggtggttcaaataatagtgactatggaggatggagtggaggtggtggtggaagc
tgggggaagtctggatcagatagaggcggatttggaggccgaggccgtggaagaaggaat
caagatggtggttcaaatgatgatgacaatgtggataaacctgcaagctggagcacaggt
tcaggtaacaatggagagtggggcagtggcgatggcactgcagggtcctggatcggagga
ggcgatgacaagaaccagcagcagagttggaagtcgagcaatgatgctggcgagggatca
ggttggaaggcaccaagtgggaatgagaacattaattggaaagcatctggttcttctggt
gtgaatgataattccggctggaataaatcaactgcttgcaaggagattgaagagagtggt
gatcagaagaatagctggggcaaagctgcaaaggcggatactcatactcaaggcggaggc
tggcagaagtcagcatctggttggaatgaaggaactgataatcaatcatcgatgaaggat
gtgaatgcagttgctagcgatggaggttggaatgatcaaagtgaaaatcaggccaaatat
tggaaatcttctgaggcttctggtgagggtcaaagttctgtctggaagccatcgacctgg
accacggacaaggaagctgacagtagccagaagggcaactggaacaaagaagccaatgca
ggtgcccaaggaggaggagggggttgggacaagcctacatccagtaacgacgctgcaggt
tggggaaaatcgagttatgcagatgatgggaaatcgttgtctggttggggtcggtga
DBGET
integrated database retrieval system
