Cucurbita maxima (winter squash): 111487220
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Entry
111487220 CDS
T05246
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111487220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111487220
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111487220
U7-dependent histone pre-mRNA processing factors
111487220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
111487220
NCBI-ProteinID:
XP_022990313
UniProt:
A0A6J1JSX2
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNAGGPTAHGESSQLQP
IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEALSGLKV
MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQG
QSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSFTPQNPLAPHQFSASQRLPLQSQIQPSL
ALQGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGEAVIPGH
NAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDGKRKIPH
GFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSM
LPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtctcagcaccgctgtgttttcgttgggaatataccttatgatgctactgaa
gagcagcttatagaaatctgccaagaagttgggcccgtagtgtcgttcagattagttatt
gaccgagaaactggaaaaccaaaaggctacgggttttgtgagtacaaggatgaagaaaca
gctttgagtgctcgtcgtaatcttcaaggttatgaaattaatggccggcagttacgagtt
gattttgctgaaaatgacaaaggtgcagacagaaatagagaacagggtcgtggcgggcct
ggattggttacaaatgctggtggcccaacagcccatggggaatccagtcaacttcaacca
attggtcttcatatagcaataactgctgctgccgtcatggcaggagcccttggtggtgca
caagctgcttctaatcagaatattttgcagagtacaacaatgcccaatgatcctttaact
ctgcatctggctaaactttctaggagtcagcttactgaagctttgtcagggctaaaggta
atggctacacaaaacaaggatttagctcgtcagctgttgctggcaagaccacaattgtca
aaagctcttttccagtcacagataatgcttggaatggtcactccacaagtgttgcagaat
cctaatttacgtcaaccttctactcatcctcagcttcctttgcatgacattcagcagggt
cagtcatcatctcttcaaattcaaccagggctgccccctcttgcacccaacagaatgcag
actggttttgtacctaaaaaagaaactcaagtatctttcacgcctcaaaatcctttggct
ccccatcagttttctgcgtcccaacggcttccgcttcagtctcaaattcagccctcactt
gctttacaaggcactttgaccggaatacctggaggctcattgcttccttccgttagtttg
ccgggaagtatgtctgttagacaacaggttcaggtgcccacctccgcttctttaaagcag
cacatgcgtcccccttctcaacagtattcaggacatggtgaagctgtaattccagggcat
aatgctcagattgctaacccagaagctaaaccttctcttctgcctcgcccttccttacca
gatgcagactttcagcctggctcctccgcagcttatggtgcttcccagatagtgggcagt
gatgctgataagtcttctcaagtacttcttggtgtagatggtaaaagaaaaatacctcat
ggcttttcaggaacaactaatcgccctgtaaagcagatcaaattagaggatggaaaaggc
agccctttctcggccggaggtctaagtgcatcagtaggtaacaatggagctagacaactt
ggaattgcctcagaccccaatcttcccggaattcaaatctcagagaaaccgacttcaatg
cttccccacgatgtcgagtctgcattactgcaacaagttttgaatttaactcccgaacaa
cttaactcgttgccgctcgaacagaggcagcaagttattcagctccagcaagcacttcgc
agagatcaaatgcggccatcctaa
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integrated database retrieval system
