KEGG   Cucurbita maxima (winter squash): 111487429
Entry
111487429         CDS       T05246                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111487429
Spliceosome [BR:cmax03041]
 Complex B
  Other components
   Complex B specific factors
    111487429
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 LisH_TPL ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_VPS8 DUF7165 Beta-prop_HPS5 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N VPS8_N Beta-prop_IFT122_2nd Beta-prop_WDR75_2nd Beta-prop_IP5PC_F zf_topless 7TMR-HDED
Other DBs
NCBI-GeneID: 111487429
NCBI-ProteinID: XP_022990593
UniProt: A0A6J1JTQ7
LinkDB
Position
Unknown
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAI
LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVAPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVEDVFPTTLSHTIKFGSKSHAECARFSPDGQFLVSCSVDGFIEV
WDYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMIASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSVVFSRDGTQLLSTSFDTTARIHGLKSGKLLKEFRGHSSYVNDAVFTND
VARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSVHLFPKNADHIVVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGEDRNMYCFSHQSGKLEHLM
KVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctacactcgaaatcgaagctagagatgtcatcaagatcgtgctccagttttgtaaa
gaaaattcactgcaccaaacattccagacgttacagaatgagtgtcaggtttctttgaat
accgtagacagcattgaaacttttgttgctgatatcaactctggacggtgggatgctata
ctgcctcaagtgtctcaacttaagcttccgagaaataagctggaggacttatatgaacag
attgtattagagatgattgagcttcgtgagttggatactgctcgtgctattcttaggcag
acacaagtgatgggtgtaatgaagcaggagcaacctgaaagatacttgcgacttgagcat
ctcttagtccgaacatactttgacccaaacgaggcttatcaagattcaacaaaagagaaa
cgccgagcgcaaattgcccaagccctagcagctgaagttactgtggttgcaccttctcga
ttgatggctctaattggccaggctctaaaatggcaacagcatcaaggtttacttcctcca
ggaacacagtttgacttatttcgtggaactgctgctatgaaacaagatgtggaggatgtt
tttccaactactctttctcacacaataaagttcggttcaaaaagtcatgcagaatgtgct
cggttctcaccagatgggcagtttcttgtttcttgctctgtagatggatttattgaggtc
tgggattatataagtgggaaactgaagaaggatcttcagtaccaggctgatgaaactttt
atgatgcatgatgatccggtcctttgtgttgattttagcagagactcagagatgatcgct
tctggttcacaagatgggaaaatcaaagtatggcgtataaggactggtcagtgcttgagg
cgtcttgaacgtgctcattctcagggagttacgagtgttgttttctctcgtgatggaacc
cagttattgagtacatcttttgacaccacagcaagaatccatggcctaaagtctgggaag
ctattgaaggaattccgtggtcattcatcatatgtgaatgatgcagtctttactaatgat
gtagcacgtgtcattacagcatctagtgattgcacggtcaaggtatgggatgtgaagaca
accgattgtctgcatacattcaaacccccgcctccattaaggggaggagatgcctcggtg
aactcagttcatttgttccccaaaaatgcagatcatattgttgtttgtaacaagacatca
tcaatatacattatgacattgcaagggcaggttgttaagagcttctcatctggtaaaaga
gaagggggagattttgttgcagcttgcgtatcaccaaaaggtgaatggatatactgcatt
ggtgaagacaggaatatgtattgcttcagccaccaatccggtaaactggagcatctcatg
aaggttcatgagaaggacgtgataggtgtgaatcatcatcctcatagaaatctcgttgct
acttatagtgaagacaacacaatgaaactatggaagccttga

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