Cucurbita maxima (winter squash): 111487604 Help Entry 111487604         CDS       T05246                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism cmax  Cucurbita maxima (winter squash) Pathway cmax03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cmax00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     111487604  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmax03019]     111487604 Enzymes [BR:cmax01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      111487604 Messenger RNA biogenesis [BR:cmax03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      111487604 SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 DUF1611 ATP_bind_1 AAA_29 FtsK_SpoIIIE MMR_HSR1 Motif Other DBs NCBI-GeneID:  111487604 NCBI-ProteinID:  XP_022990827 UniProt:  A0A6J1JJY4 LinkDB All DBs Position Unknown AA seq 438 aa AA seqDB search MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPYVDVVKLQKSGGVV SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA GDLPGKYLIVGTLTWIET NT seq 1317 nt NT seq  +upstreamnt  +downstreamnt atggcgtacggtggtcctgccacggtggctggctcagcttcgacttcgtctgtcagacag gttaagctggatagggagagcgagctcaggattgaagttggaaacgactcgcctctccgt ttacggctgctctctggcaatgctgagatctttggcacagagcttcctcctgaaatatgg ctcactttaccaccaaggctgaaaattgctgtcttcacttggtatggagccacgcttgaa atggatggtgcgactgaaactgattatacggcagatgagacacccatgatcggttatgtg aatgtccatgccattcttgaagcacgaagaagccgtgctagagcttcatcagctgatgac tccggttctacacagggtccaagggtcattgttgtggggcctaccgattcagggaagagc accttgtcaaggatgcttcttagttgggctgcaaaacagggttggaagcctacatttgtg gatttggatattggccaaggatctataacaattcctggatgcattgctgctacccctatc gagttgcccattgatcctgtggaaggcatccctctcgaaatgcccctggtttacttttat ggacacacaactccaagcaataacgttgatctgtacaaagtgcttgtgaaggagcttgcc caagtgctggagaggcaatttactggcaatgcagaatcccgagctgcaggtatggttatc aacacaatgggatggatcgagggtgtaggctatgagctgcttctacatgctatcgataca ctcaatgctaatgttgtcctggttttgggtcaggagaagctttggagcatgctcaaagat gtactaaagaataagccttacgtagatgttgtgaaacttcaaaagtcaggtggtgttgta tccagaaacgctaaatatcgtcagaaggccaggagttacagaataagggaatatttttat ggacctgcaaatgatctctcaccccactcaaacatcgcaaacttcagcgatctgtttatt tatcgcattggaggtgggccacaggccccgcgttcagctctgccaattggtgcagaaccg gctgcagatcccacaagattagtgcctgtcaatattaatcgggatttgctccatttggtt cttgctgtttcatttgctaaagaacctgatgaaattatctcaagcaatgttgctggattt gtgtatattactgatatcgacatccaaaggaagaaaattacatatctagcgccatcggca ggggatcttcctggcaaatatttgatcgtgggaactttgacctggattgagacctga

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