Cucurbita maxima (winter squash): 111487951
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Entry
111487951 CDS
T05246
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111487951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111487951
Spliceosome [BR:
cmax03041
]
Common components
Common spliceosomal components
SR proteins
111487951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
111487951
NCBI-ProteinID:
XP_022991236
UniProt:
A0A6J1JQ69
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRGVSRRSDFRVLVTGLPS
SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
YVRVREYDSKRDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVK
SRSRSASPARSRSKSSSLSGSRSKSRSPAPNREKRTSKSPKRREASKSPSRSKSKSPSR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgtgccagcagaacagtctatgttggcaatctcccgggtgatattcgtgag
aaagaagtggaagatttattttacaagtatggtcgcatagcccacattgatctcaaggtt
ccaccgaggcctcctggttatgcatttgttgagttcgaagatgcggaagatgctcaagat
gcaattcgtggtcgcgatggctatgattttgatggccataggttgcgcgtggaacttgct
catggtggtcgtggtcattcatcgtctagtgatcgttatagtagtcatggaagcagccga
ggtgggcgtggagtatctcgacgctctgattttcgtgtattagtcacagggttaccttct
tctgcttcgtggcaagacttaaaggatcacatgcggcgagctggggatgtttgtttctcc
caagtgttccgtgatggtagtggaaccacagggattgtggattacaccaactatgatgac
atgaagtatgcaattaaaaaactggatgactctgagttccgtaatgcattttcccggtct
tatgttcgtgtgagggaatatgattcaaagagggattcatccaagagtcctagtcgtggg
cggtcatactctagagggcggagttacagtcgcagtcatagtagaggtcgaagtaggagc
aagagtcgcagtaggagcaagtctcctaagggtaaatcttcccagcggtcacctgtaaaa
tcccgatcaaggtctgcttcccctgctcgttcacgatcgaagtcatcatctctttcagga
tcgcgatcaaaatccaggtctccggcacccaatcgtgagaaacgcacgagtaaaagtcca
aaaaggcgtgaagcaagcaaaagccctagcaggagcaagagcaagagtccttcccgatga
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