Cucurbita maxima (winter squash): 111488022
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Entry
111488022 CDS
T05246
Name
(RefSeq) uncharacterized protein LOC111488022 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111488022
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111488022
Surveillance factors
Other surveillance factors
111488022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
111488022
NCBI-ProteinID:
XP_022991365
UniProt:
A0A6J1JLM0
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MAHGKFDLPDDLLSSRPSDHSWMPKVEASGGNDEEKVLTAFLDESKDSVASENSIPLSPQ
WLYARPSETKVEVRAPTPVSLAISTDLNQKEGWRPDGSEDKKDWRKNTSESESGRRWREE
ERETGLLGGRRRKTERRIDNMSTKETIEGRILPNSDRWHDGRTSGHDSRTSGHDGRTSGH
DGRASGYDSRTSGHDARRDNKWTVRWGPDDKEKETRMDKRSDADKEDVRNDNQSVSGNRP
VSERDSDSRDKWRPRHRMESHSVGSTSSRAAPGFSLERGRGDGGSNLGFTIGRGRSSTIG
RSTGSPGVPLLNKIENVPGKPRYSTHAFCYPRGKLLDIYRRQKSDPSFSALPNDIEELQP
VTQLSVVEPLAFVSPDAEEETTLGDIWKGKITSSGVVNNSHKKGKISECILGDVDSIDGN
QTGLDSTSGSDNVAATPNEDIANATHEVTYDEACQDASDRGIWSHPSMRDVLDGQFISHK
EEEKRSGAAVSMSNYGGLAHTVSTVASQHVMEIGSGYPGTQLNVGVSGRADSDHIRPHNF
DEIEFSNSFDVRSKLSDDPSSIFFIPFSEQNPNKSSDVKSEELSLFYLDPQGVMQGPFIG
ADIILWYEQGFFGLDLPVRLADAPESPFCELGEVMPHLKVREGSVDCADTKSLSGQSGAS
GGIMETNLSSKHPALDMNEASTTNEVHRSLAELHSLSNQQIPSGISETESPFHLHSKGQS
FHDVVAQNEEIVFSGRPGNDGYQFPNSSGVLPLVNSISQPSLSNESTDRSVPVQNENKLH
PFGLLWSELEGTNMKPVEATNSKHAKSVNMPSSMVRTAPVVGKGEASLNAETWLDVYRRS
MHSDQSVYQDANVAHSLPHIEQESNRFDLADQLMSHQYHQALQQRNLLSHSNEATLDHHM
QQQSLIHQQQLLANRSTPDLDHFLSLQMQQQHQQQQQRQLQLQHQLQQQQLQQQQKLLHE
QHHSQVQQALIEQLLHRQMHDSGLVQSHIDPIRANNALDQVIMEQRLLHELQQQSHHQHR
SVDPSFEQLIKAKFGHLPPQKEQQRDLSELISRAQHGHMQPLDHQILQQEMLQSRQLSAL
RQRANMEDKRHVAGPIWQEDEADQQFFRGHAVTQRLPSSGFESFQHQQRQTHVGPLNHVE
RNLSFQDRLRLGLYEPASVPLERSISYPDVAQGMNLDVVNAMAHARALELQESSAHNPPG
GQLGQYAPSTIPQNHHHSLVSNQFHVSHFDRTEGSWSEENDRLGNDWMESRIQQLHINAE
QQKRELEAKMISEDPTLWMSDGLNDEKSKQLLMELLNQKSVHQPTESLDVGSGPSFKRAS
SGLYSGSGSLEQSFILHSAGKERGLNNTSSMGPYGSNSYEPLQDEHPGSLTSNEKVPYRS
DSVSVVKGASILAGLKANGAVNHSSSTMAGNLSMNKDVLDVEGRARGLKGEGLMKTQAFQ
IQESMLDQVASTDRGEFSIDTHTLSRHSSLGSAGLHNEKIANTFPEEIAKDPVPTHNKDN
TLLKRPPVSRTSASQDGLSVLFSDPVVRGKNLDGGRLEPTGILVNQENMAAVKKEMRFRR
SSSCSDSDVSETSFIDMLKKTALQEAHPTTGVVSEPSDGMQGGGKGGKKKGKKGRQIDPA
LLGFKVTSNRIMMGEIQRLDD
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggctcatggaaagttcgatctccctgacgatcttctctcctcccggccctccgatcac
tcgtggatgcccaaagtggaagcttctggagggaatgatgaggagaaggtgctcacggcc
ttccttgatgagtcaaaagactcggtggcttcggagaacagcatacctttgtcccctcaa
tggctatacgccagaccaagtgaaactaaggtggaagtgcgtgctccaacaccagtgtcc
cttgctatctccactgatctcaatcagaaagagggttggcgcccagatgggtctgaggac
aagaaggattggaggaaaaatacttctgaaagtgaaagtggccgccgttggcgagaggaa
gagcgagaaactggcttacttggtggccgccgcaggaaaactgagcgccgcattgataac
atgtcaactaaggagacgatagagggtagaatcttgcctaattcagacagatggcatgat
ggtcgtacttctgggcatgatagtcgcacttctggtcatgatggtcggacttctggacat
gatggtcgtgcttctgggtatgatagtcgtacttctggtcatgatgcacgacgcgacaac
aaatggacggtgagatggggaccagatgacaaggaaaaggaaacacggatggacaagcga
tcagatgctgataaggaagatgttcgcaatgacaatcaatcagtgagtggcaatcgccct
gtttctgagcgtgactctgattcacgtgataaatggaggcctcgccataggatggaaagc
cattcggttggttcaacttcctctcgtgctgcacctggtttttcacttgagagagggcgg
ggagatggggggtctaatttaggatttacaattggaagaggaaggtcaagtactattggg
agatcaactggatcccctggagttccactcttgaataagattgaaaatgttcctgggaaa
ccaagatattcaactcatgccttttgctaccctaggggtaagcttcttgacatatatagg
aggcagaaatctgatccatcgttctcagctctgcctaatgatattgaagaattgcagcct
gtgactcaacttagtgttgtagaaccattagcttttgtttctccggatgctgaggaggag
actacacttggtgacatatggaaaggaaaaatcacaagtagcggggttgtaaacaattca
cataagaaagggaagatatctgaatgtattttaggagatgtagactccatagatggaaat
cagactgggttggattctacttcaggatccgacaatgtagcagcaactccaaatgaagat
attgctaatgcgactcatgaagttacatatgatgaagcatgccaagatgctagtgacagg
ggcatttggagtcatccttcaatgagagatgtcctagatggacaatttatcagccataag
gaagaggaaaaaaggtctggtgccgctgtttctatgtccaactatggtggattggcccac
acagtatctacagtagcctcccaacatgtgatggagattggtagtggataccctggtact
caattaaatgttggtgtgagtgggcgagcagattctgatcatataaggcctcataacttt
gatgaaattgagttttccaattcctttgatgtcagatccaagctttctgatgatcctagt
tctattttctttattcccttctctgagcaaaatccaaataaaagttctgatgtgaaatct
gaggagttgagtttgttctatcttgaccctcaaggggttatgcaggggccatttattggg
gctgacataatcttgtggtatgaacaaggtttctttgggttggacctgcctgttcggttg
gcggatgcccccgagtccccattctgtgagctgggggaggttatgccacatttgaaagtt
agagagggaagtgttgactgtgctgatacaaaatctctttcaggccagtctggtgcctcg
ggaggaataatggagacaaatttatcttctaagcatccagctcttgatatgaatgaggca
tccacaaccaatgaggttcatcgttctttggctgaattacatagcctctccaatcaacaa
attccatctggaatttctgagactgaatcaccatttcacttacattccaagggtcaaagc
tttcatgatgttgtggctcagaatgaagaaattgtgttttctggaagacctggaaacgac
ggttatcaatttccaaactcttctggtgtactgcctttggtgaattctattagccaacct
tctctttcgaatgagtcaactgatcgcagtgtgcctgttcagaatgaaaataagttgcac
ccttttggattgttgtggtctgagctggaaggtacaaatatgaaaccagttgaggccaca
aattcgaaacatgccaagtcagttaacatgccttcaagcatggtaaggactgcaccagta
gttgggaagggggaagcatctctcaatgcagagacatggcttgatgtttacagaagaagt
atgcattctgaccagagtgtataccaggatgcgaacgttgctcattccctgccacatata
gaacaagagtctaataggtttgatttggctgatcaactcatgtcgcatcaatatcatcag
gcacttcaacagcggaatttgttgtctcactctaatgaagctaccttagatcatcatatg
caacagcagagtcttattcaccagcaacagctgttggctaatagaagtacaccagatctt
gatcatttcttgagcttgcagatgcaacagcaacatcaacagcaacagcaacggcagctg
cagttacagcaccaattacagcagcagcagttgcagcagcagcaaaagcttttgcatgaa
caacatcattctcaagtccagcaggcgctgattgaacagttgttgcatagacaaatgcat
gattcaggccttgtgcagtcacatattgatccaattagagccaataatgctcttgatcag
gtgatcatggagcaacgtcttttacatgagttacagcaacagtctcatcatcaacataga
tctgttgatccatctttcgagcagcttattaaagcgaagtttggtcacttgccaccacaa
aaagaacaacaaagagatttgtctgaattaatttctcgggctcagcatggacacatgcaa
ccattggatcatcaaattctccagcaggaaatgctacaatcgagacagttgtcagcatta
aggcagagagccaatatggaggacaagagacatgttgctggtcctatctggcaagaggat
gaggctgatcagcagtttttcagaggacatgctgtcacacaacgtttaccatcttcaggg
tttgaatcattccagcatcaacagaggcaaactcatgtagggccgctgaatcatgtagag
cgcaatctttcatttcaagatcggttaagactaggtctttatgagcctgcttcagttcca
cttgaaagatcaatatcctatcctgatgtagctcaggggatgaatctggatgttgttaat
gctatggcccatgctcgtgctttagaattacaagaatccagtgcacacaatccacctggt
ggtcaactgggacaatatgcacccagtaccattccacagaatcatcatcactctctagtc
agtaaccaatttcatgtttcacattttgatagaactgaaggaagctggtctgaggaaaat
gaccgacttggaaatgattggatggagtctcgcattcaacaactgcatatcaatgctgag
caacagaaaagggagttggaagctaaaatgatttctgaggatccaactttatggatgtca
gacgggcttaatgatgagaagtcaaagcagttattgatggaactcctcaatcagaaatct
gttcatcaacctacagaatccttggatgttggaagtggaccatctttcaagagagcatca
tctggcctctattctggatcaggctctcttgaacagtcgttcattcttcattcagcaggc
aaggaaagaggtttgaacaacacatcgtcaatggggccttatggttctaattcttatgaa
ccactgcaagacgagcatcctggcagcttgacaagcaatgagaaggtcccatacaggtcg
gattctgtctctgttgttaagggagcatcaattttggctggtcttaaagccaatggtgca
gttaaccactctagttctaccatggctggtaacctttctatgaataaagatgtattggat
gtggagggcagggctcgaggattgaaaggtgagggtttgatgaaaactcaagcttttcaa
attcaagaaagcatgcttgatcaagtggcatctactgatcgtggggaattttcaatagat
actcatacccttagtcggcattcttctcttggttctgctggccttcacaatgaaaagatt
gctaatacgtttccagaagagattgctaaagacccggtgcccactcacaataaagataac
actttgttgaaacgccctcctgtctcacgcacttcggcatcccaggatggattgtctgtc
ctgttttccgatccagttgttagagggaagaacttggacggtggaagactggagccaact
ggtatcttggtgaaccaagaaaacatggcagctgtgaagaaagagatgcgttttcggcgc
tcttcttcttgtagcgacagcgacgtgtcggagacttcatttattgatatgctgaaaaag
acagcactgcaagaagcccatccgacaacaggggtagtttcagagccatctgatggaatg
cagggaggggggaaaggtgggaaaaagaaagggaagaaggggagacaaatagacccagcc
ctactgggtttcaaagtcaccagcaaccgaattatgatgggagaaattcaacgcttagac
gattag
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integrated database retrieval system
