Cucurbita maxima (winter squash): 111488372
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Entry
111488372 CDS
T05246
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111488372
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
111488372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
FKBP15
AAA_15
ABC_tran
AAA_27
Motif
Other DBs
NCBI-GeneID:
111488372
NCBI-ProteinID:
XP_022991849
UniProt:
A0A6J1JVZ1
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MAEAKHRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSS
IVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITITRKMDTHNKS
EWLFNGKVVPKKDVSGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQ
LPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQEKDVERVRQREELLEKVESMK
KKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEKQRKEKAKLDAKTKKY
STLINNNHKKRMELQETENHLGVQVQGKLKEMEDLRKQEESRQQRILQAKEELEAAELEL
QNLPPYKHPKDEIERLRAQILELEVSASQKRLMKSEIEKNISQKRNTLRQCLDRLKDMEN
ANAKLLQALRNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPS
YAWKSFITQDSDDRDIMVKNLGSFGVPILNYVGGERRTNQHFEVSEEVRAFGIYSRLDQI
FDAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHM
SGTVEPVDRSRLLLCNLDAGEIDGLRSRKNELEESISALEENCKSCQTELRLIEDEEAKL
RKHRDDILNTVQHEKRKRREMENRVDQRKKKLESMEREDDLDTVVAKLADQATNFNVQRF
HCAIEIKHLLVEAVSYRQNLTKSHMSSIEIEAKIRELEVNLKQHEKFALQASVQFEYCKK
EVEDYRQQLSVAKKHAESIAVITPDLEKEFLEMPTTIEELEAAIQDNISQANSILFLNHN
VLEEYEHRQHQINTIARKLEADKHELRKCMAEVDELKGNWLPTLRKLVSQINETFSRNFQ
EMAVAGEVLLDEHDMDFDQYGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQD
LTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSGACSIL
NIMNGPWIEQPSRAWSNGDSWGTLMNYVGESRC
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccaagcatcgcgcaaagcgccctagaattacgaggggggacgatgattat
atgcctggaagtataattgagattgagcttcataactttatgacctttaaccacttgaaa
tgtaagccaggatcacgtctaaaccttgtaattgggcccaatggatctggtaaaagctct
attgtatgtgctattgcccttggccttggtggtgagcctcagctccttggaagggcgacc
agtgttggagcatatgtgaagcgcggggaggagtctggttatgtcagaataaccttgaga
gggaatactaaagaggagaatattacaattacacgtaaaatggacacacacaacaaatct
gagtggttgttcaatggaaaagttgtgccaaaaaaggatgtatctggaatcattcaaagt
tttaacattcaagttaataacttgactcaatttttacctcaggacagggtttgtgagttt
gccaaattaactcccgtccaacttttagaagagactgaaaaggcagttggtgatcctcaa
cttccaatcctacatcgtgtacttgttgagaaaagccatgacataaaaaatatagaacga
gctgttgagaaaaatggagacaccttagatcagctaaaggcattaaatgtcgagcaggag
aaagatgttgagcgtgttcgtcaaagagaagaacttttagaaaaggttgagtccatgaaa
aagaagctgccatggctgaagtatgacatgaaaaaggctgaatacatggaagttaaggaa
aaggaaaaggaggcaaaaaagaagttagatgaagctgcaaatactttgaatgatttaaag
gagccaattgagaaacaaagaaaggagaaggcaaagttggatgcaaaaactaaaaagtat
agcactctcattaataataatcacaagaaaaggatggaacttcaggaaactgaaaatcat
ttgggggtgcaagtgcaaggaaaattgaaagaaatggaagacttgaggaaacaagaagaa
tctcgtcaacagagaatcttacaagctaaagaggaacttgaagctgctgaattggaactc
cagaatttgcctccttacaaacatcccaaggacgagattgaacggttgcgcgctcaaatt
ttggagctggaagtttcagcaagtcagaagagacttatgaagtcagagattgaaaaaaat
atatcccaaaaaagaaatactttgaggcagtgcttggataggttaaaggatatggagaat
gctaatgcaaaactactacaggcattgagaaattctggaacagagaagatttttgaagct
tatcactggcttcaagaacatcgccatgaattcaagaaggaggtgtatggtccagtgttg
ctagaggttaatgtgtcaaatcggactcatgctgactacttagaaggtcatatcccatca
tatgcctggaagtccttcataactcaagattcagacgatcgtgacataatggtaaaaaac
ttgggttcatttggcgttcccatcttaaattatgtgggaggtgaaaggcgcacaaatcag
cattttgaggtgtctgaggaggttcgtgcatttggcatatattctcggctagaccaaatt
tttgatgctcctgcagctgtaaaggaggttttgaccatgcagtttggtttggagcattca
tatattggctcaaaggtaactgatcagaaggcagacgaggtctcaaaattgggaatttta
gatttttggactccagataatcattatcgatggtctcgctctagatacggtggtcatatg
tcgggaactgtggaaccagttgatcgctcacgtcttctcttgtgcaacttggatgcggga
gaaattgatgggcttcggtccaggaaaaatgagctagaagaatctatttctgctttagaa
gaaaattgtaaatcatgtcagactgaactaagattgatagaggacgaagaagctaaactt
cgcaaacatcgggatgatattttaaatactgtgcaacatgagaagagaaaacgccgtgaa
atggaaaatcgcgttgatcaaagaaaaaagaaattagaatctatggagcgggaagatgac
ttagatactgttgtggccaagcttgccgaccaagctacaaattttaacgttcaaaggttc
cattgtgcaattgaaattaagcatttgcttgttgaggccgtttcctatagacagaacttg
actaagagccatatgtcctccattgaaattgaagcaaagatcagagaattggaggtaaat
ctgaagcagcatgaaaagtttgctctgcaagcgtcagtgcagtttgagtactgcaagaag
gaagtcgaggactatcgacagcaactctcagttgccaagaagcatgcagaatctattgct
gtgatcacacctgaccttgagaaggaatttcttgagatgcctactacaattgaggaattg
gaagctgctattcaagataatatttctcaggctaattccattctgttcttaaaccataat
gtgcttgaggaatatgaacatcgtcagcatcagataaataccattgcacgaaaactagaa
gctgataaacatgaactaaggaagtgtatggctgaagttgatgagctgaagggaaattgg
ctcccaactttaagaaaacttgtttctcagataaatgagacttttagtcgcaattttcaa
gagatggctgttgctggagaagtgttattggatgagcatgatatggacttcgatcaatat
gggattcttattaaagtgaagttcagacaagcaggtcagcttcaggttctcagtgcgcat
catcagtcgggaggggaacgctcggtgtcgacaatcttgtatcttgtttcccttcaagac
cttaccaactgcccatttagagtagttgacgagataaaccaaggaatggatcccataaat
gaacggaagatgttccagcagttagtgagagctgccagccaaacaaatacaccacagtgc
ttcctactcactccaaagttacttccagagctggaatatagtggggcctgcagtatactg
aatataatgaatggtccttggatcgagcagccctcgagagcatggagcaatggagatagc
tggggaacattaatgaactacgttggagaaagccgatgttga
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