KEGG   Cucurbita maxima (winter squash): 111488523
Entry
111488523         CDS       T05246                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmax03036]
    111488523
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111488523
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111488523
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111488523
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 111488523
NCBI-ProteinID: XP_022992062
UniProt: A0A6J1JNP3
LinkDB
Position
Unknown
AA seq 1148 aa
MAELSKLAQYIESFVDVSHTPSQQATSLEAIISLVKNNVVTIKTLVTEMGMYLTITDHII
RGRGILLLGEVLACLASKPLDDATIHSLMTFFIERLADWKALRGALIGCLALMRRKMEVG
TVSQTDAKSFAQSYFQNLQVQSLGQHDRKLSFELLVCLLEHYPDAVVSLGDDLVYGICEA
IDGEKDPHCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPIHFTHGKEEDVDV
TRNDLSQALMMAFSSNPLFEPFAIPLLLEKLSSSLPLAKIDSLKYLSDCTVKYGADRMEK
HSEAVWSSVKEIIFTSIEQPSLSFNLESLDSPSFQGNEMIIEALRLLQKMVVKSNGSFLR
LIINDEDIKEIFNILNIYTCYNDLPLQSRQRLNAVGHILYKSANASVASCNHVFESFFLR
LLDFVGISVDQSDNCKISPSRNFNFGALYLCIELLAACRDLYASCDEQTCSVKEKSYNML
QTFSRSLVQLLNSTFPGIPKKNLHDAEFYCAVKGLRNLATFPVGSSPVSSVVFEEILLGL
MSFITMNLKCGSLWNHALKALQHIGSFVDRYHGSVEWQSYMHVVVEKIAPMFSLHDEALP
LTLKLKMASDIGRSGRSYMLKIVQGIEEATSFHLTEVYSNGNSKSVEILLSLLDCYSTKI
LPWFDEAGDFEEVILRITFNIWDQIEKCLVFSTSMDKALLDATMMALKLSVRSCSKESQN
IIIQKAFNVLLTSSFSPSKVALSTTIPVQMEGLQLLQQKDSPLSRDEWILSLFASVIIAL
RPQIHVPDVRSVMRLLMLSITRGCIPAAQALGSMINKLSLKFDKVEVSNYVSLEEAIDII
FNTKFRCFHNGSTRDGSEMLLTDLCSSIEKGSLLPVHVVVGLSWIGKGLLLFGHEKVRDV
TMVFLQCLVSKSRTDASPLQKVILEKDCETNLDFAVMNCAADAFHILMSDSEACLNRKFH
AILRPLYKQRFFSTMMPIFQSLVSKSDESLSRYMLYEAFAHVISDTPLTAILSDAKKVSL
NLIPMLLDGLLALSVNIINKDVVYSLLLVLSGILMDKNGQEVVTENAHKIVDCLAGLTAF
PHMMLVRETAIQCLVAVSELPHARIYPMRMQVLHAISKALDDPKRAVRQEAVRCRQAWAS
IASRSLNF
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggcggagctcagtaagcttgcacagtacatcgagtccttcgtcgacgtatctcatact
ccgtctcaacaggccacaagcttggaagcaatcatctcccttgtgaagaacaatgttgta
acaataaaaacactggttacagagatgggtatgtatttgacaattactgatcacattatt
cgaggcagaggtatacttcttcttggggaagttcttgcatgtcttgcatcaaagcctctg
gacgatgcaacaatacacagtctaatgacgttctttatagagagactggcagattggaaa
gctttacggggtgcccttattggctgcttggcactgatgaggaggaaaatggaagttggg
acagtttctcagactgatgcgaagtcttttgcccagtcttattttcaaaatcttcaagta
cagtccttgggacagcatgatcggaagctgagttttgaacttctggtgtgccttttggaa
cattatcctgatgctgttgtttcactgggtgatgatcttgtgtatggaatctgtgaagcc
attgatggtgaaaaagatccacactgcttaatgcttacttttcacatcgttgagcttgtg
gcaaagctattcccagatccaactggaacacttgctagtagttctagcgatctttttgaa
ttcctgggttgctatttcccaatacattttacacatggaaaagaggaggatgtagatgta
acaaggaatgatctttcgcaggcacttatgatggccttctcatcaaaccccctctttgag
ccatttgcaattcctttgcttcttgagaaactttcatcgtcattgccactagcaaagatt
gattctttgaagtatctgagtgattgcaccgtaaaatatggggcagatagaatggaaaag
catagtgaagctgtctggtcttcagtaaaggagattatatttacatcaatagaacaacct
tctttgtcctttaacttagaatcattggatagtcctagctttcaagggaatgaaatgata
atagaagctctaagactcctgcagaagatggttgtgaagagtaatggatcatttttaaga
ttaattatcaatgatgaagatataaaggaaatatttaacatcctaaatatttatacatgt
tacaacgacctccctctgcaaagcaggcagagactaaatgcagttggccatatcctttac
aagtcagcaaatgcatctgttgcttcctgcaaccatgtgtttgaaagtttcttccttcgt
ttgctggatttcgtggggatttcagtggaccagtctgataattgtaaaatttctccctca
aggaattttaactttggagccctttatctctgcatcgaactacttgcagcatgcagagat
ctgtatgcaagctgtgatgaacaaacatgctctgttaaagagaaatcatacaacatgctt
caaactttttcgcgttcattggttcagctcctcaattctacctttccaggaattcctaag
aaaaatctgcatgatgctgaattctattgtgcagtaaagggcttgcggaatctggccaca
ttccctgtaggttcttcacctgtatcaagtgtcgtatttgaggaaattttgttgggtctc
atgtcatttataaccatgaacctcaaatgtggatcgttgtggaatcatgccttgaaggca
ttacagcatattggctcatttgtcgacagatatcatgggtccgtggaatggcaaagttac
atgcatgttgttgttgaaaagattgcaccaatgttctctcttcatgacgaggccttgcca
ctgacacttaaacttaaaatggcttctgacattggtagatctgggcgaagttatatgctg
aaaattgttcaggggatcgaagaggcaacgtccttccatttaactgaggtttatagcaat
ggcaattcaaagtcagtcgagattctattgtccctgttggattgctactcgaccaaaatt
cttccatggtttgatgaggctggagattttgaggaagtcatattgcgcattacatttaac
atttgggatcaaattgaaaaatgtttagtttttagcacatcgatggataaagcacttcta
gatgctaccatgatggcattgaaactctctgttcgaagttgttcgaaagagagccagaac
attataatccaaaaagcattcaatgtattgttaacaagcagtttttctccttcgaaagta
gcattatctacaacaataccagttcagatggagggcttacaacttctgcagcagaaagat
agtcctctttccagagatgaatggatcctttcattatttgcatcagtcattatagcactt
cgtccacaaatacatgttcctgatgtgagatcagtaatgcgtttgcttatgttatccatc
accaggggctgtataccagctgcacaggcactaggttctatgatcaataaattgagtctg
aagtttgataaagtagaagtctcaaattatgtttctttggaagaagctattgacattatt
ttcaacacaaaatttaggtgtttccataatggaagtactcgtgatggcagtgaaatgctg
ctcacagatttatgctccagcattgaaaaaggctctttgcttccagttcatgttgtggtt
ggattatcatggattggaaaaggtttgcttctttttggtcatgaaaaggtccgagatgtt
accatggttttcttgcagtgcttagtatcaaaaagtagaacagatgcctcacccttgcag
aaggttatactggaaaaagattgcgagacaaacttagactttgcggtcatgaattgtgca
gcagatgcatttcacattcttatgagtgattctgaagcatgtttgaaccgcaaattccat
gcgatactacgaccactttataagcagcgttttttctctaccatgatgcctattttccag
tctctagtaagcaaatctgatgagtcactttccagatatatgttgtacgaggcatttgca
catgtcatatctgatactccactcactgctatattgagtgatgcgaagaaggttagctta
aatcttattcctatgcttttggatgggctgttagcattaagtgtgaacatcataaataag
gacgtggtgtatagccttcttcttgttttatctgggatattgatggataaaaatggacaa
gaagttgtcacagagaatgcacataaaattgttgattgccttgctggactgactgccttt
cctcatatgatgcttgtacgagaaactgctattcagtgccttgtcgcggtatctgagcta
ccccatgcaaggatataccccatgagaatgcaggtactgcatgcaatatcgaaagctctt
gatgatccaaagagagctgttcgacaagaagctgttcgatgccggcaagcatgggcatca
attgcatcaagaagtcttaatttctga

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