Cucurbita maxima (winter squash): 111488569
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Entry
111488569 CDS
T05246
Name
(RefSeq) protein LHY isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111488569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmax03000
]
111488569
Transcription factors [BR:
cmax03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111488569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
111488569
NCBI-ProteinID:
XP_022992145
UniProt:
A0A6J1JSR5
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MEPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEALIKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKL
LTLVSSSQSKQILDLEKEPLNEATSGEEQATSEMDTHDDNCSEVFTLSREANFFSWKNKN
SVPAQVKLNLNDLCAFREFVPSFKELDAKQPLHDKGRGKVSEFEIASASQEKIVSAEKKE
SLSCVLSGDEMQVAHNYPRHVPVHVVDGSLGTNVQESVTDTPLQESSFNPAMEIPGEHNI
HRNPSDSVSLERQNNAPRCIYQSYPTVHPTPFTLLPPNQENYKSLLHMSSSFSNLVVSTL
QQNPAAHAIASLTATCWPYVNPEASVDSPMCDKESFRTKQMNSTPSMEAIATATVAAATA
WWAAHGLLPLCAPFHSAFTSSAISAPVAQPSDTCPNPESKDKAESSMQIDAEQSEALTAQ
HSGSKSPTHSSSDSEGSGGANANANATVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCG
SNTPSGSDQEIDATENNDKEEKEEKELEMNCPASESSNRRSRCISNINESWKEVSDEVKR
GRLAFQALFTRDILPQSFSPSYNVENENEKNENVEKDSNIIDKDSCASVMDLSSKICGPS
RDQVMERYTSATGDNNGEGKILTIGQGNGTPKGCRTGFKPYKRCSVEAKEKRMTTSSNHS
EEGDQKRLRLEQKATN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaactcctcaggagaagacttggtttttaagaccaggaagccatatactatt
acaaagcaacgagagcgctggacggaggaggagcacaatcgatttttagaggcgctgaag
ctctatgggcgagcatggcagagaattgaagagcatattggaaccaaaactgcagtccag
atacgaagtcatgcacagaagttcttttcaaagttggaaaaggaagcactcattaaggga
attcctgtaggacaaactcttgatatagatattccaccacctcggccgaagaggaaacct
agtaatccttacccaaggaaaactcctatatcaaagttgggtgcaaatgacgggaagctc
ttgactttggtgtcttcttcacagagcaaacaaatcttagatttggagaaagagccactg
aatgaggccactagtggagaagaacaagcaactagcgaaatggatactcatgacgataat
tgctcagaagtatttaccctttcacgagaagctaacttcttttcttggaaaaacaaaaat
tctgtacctgcgcaagttaaactgaacctgaacgacttgtgtgctttcagggagtttgtg
ccttcatttaaagagcttgatgcaaaacagccactccatgataaaggcaggggcaaggtt
tcagaatttgagattgcaagtgcttcacaagaaaaaattgtgtctgctgaaaagaaagaa
tctttaagctgcgtactgtctggagatgaaatgcaagttgctcataactatccaaggcat
gtgcctgtgcatgtggtcgatggaagcttgggaacaaatgttcaagagtctgtaacagac
actccgctgcaggaatcctcttttaatccagcaatggagattccaggagagcataacata
catcggaatccatctgattctgtttccttggaacgtcaaaataatgcacctaggtgcatt
tatcaatcatatccaactgttcaccccactccatttaccttacttccccctaaccaagaa
aattataagtcacttctccacatgtcctcctcattttcaaatctcgttgtgtctaccctt
caacaaaaccctgcagcccatgcaatagcaagtttgacagcaacatgttggccctatgtg
aatcctgaagcttctgtagattctcccatgtgtgataaggaaagttttagaaccaagcaa
atgaactccaccccaagtatggaagccattgctacagcaactgtagcagctgcaactgca
tggtgggcggcccatggactgctacctttatgtgccccttttcattctgcctttaccagt
tctgctatatctgctcctgtggcacaaccatcagatacctgtccaaatcccgagtccaag
gacaaagcagaaagttccatgcaaattgatgcagaacaatcagaagctttaactgctcaa
cattcaggttccaagtcacctactcattcatcatctgattctgagggtagtggaggtgca
aatgcaaatgcaaatgctacggtgaaacctgcccatgacgagaagacacctgctgaggtt
gagtttcatgattcaaacaagggaaagaggggaaaacaagtagatcgttcctcatgtggt
tccaatacaccatctggaagtgatcaagagatagatgcaacagaaaataatgataaagaa
gaaaaggaggaaaaagagcttgagatgaattgtccagcttccgagtccagtaatcgtcgc
agtagatgcatcagtaacataaatgaatcttggaaggaggtttctgatgaggtaaaaagg
gggcggttggcttttcaagctctcttcactcgtgacatattgcctcaaagcttttcacct
tcatataatgtagaaaacgagaatgagaagaatgagaatgttgagaaagatagtaacatt
atagataaagatagttgtgcatccgttatggaccttagcagcaagatttgtggaccttct
agagatcaagttatggagagatacacatcagcaacaggtgacaacaatggagagggaaaa
attctcacaattggacaaggaaatggaacacccaagggttgtcgaacaggattcaaacct
tataaaagatgttcagtggaggcaaaggaaaagagaatgacaacatccagcaaccacagt
gaggagggagatcaaaaaagactacgcctggagcagaaagccacaaattga
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