Cucurbita maxima (winter squash): 111488591
Help
Entry
111488591 CDS
T05246
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111488591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111488591
03036 Chromosome and associated proteins [BR:
cmax03036
]
111488591
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111488591
Coactivators
SAGA/TFTC/STAGA complex
111488591
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111488591
STAGA complex
111488591
TFTC complex
111488591
SAGA complex
111488591
SLIK complex
111488591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
111488591
NCBI-ProteinID:
XP_022992188
UniProt:
A0A6J1JYH2
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MADSTSSPRPVQTNPMDPSPPPPQHQPQVQPSTTAVPQNSSNPSNSSVNPPIPSPSALVQ
SPSIDHLHPLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQAQQQQQQQQQQQQ
QQQQQQQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQQFGMMRQQS
ALYSQMNFGASSTNQQQQQPNQQQQIGTGSLSRSALIGQGSHLPMLSGAAAAAQYNLQSQ
LLASSKQKAGLVQGAQFQSGNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRIN
QGQIRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQSNMIQNSLQQQQWLKQI
PTMSTPGSPSYRLQQRQQVLLQQQLASSSQLHQNPMSLNSHQFPQLVQQQPSIGHQQQQP
QAQQQQPQQQQLQQQTLHQQQQLLQQPSPQNSLQPVLHQHQHQQHSPRIAGLVGQKSLSL
TGSHPDATASGTSTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEIA
DDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNIPGYSSDERKNQNKSLSSSDV
HKKRLDMIRILKEASCVETNINTPKEMVRQGVGMSIGTNTLTRPSPSSEQLLSQTAGSQL
LQQMTRF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcggatagtacttcgtctcctagaccagtccaaacgaacccgatggacccttcgcca
ccgccgccgcagcatcaaccgcaagttcaaccttcaaccaccgctgttccacaaaattca
tcgaatccgtcaaattcctctgtaaatcctcccattccatcgccttctgcgcttgttcaa
tcaccttcgattgaccacttacatccgctatctcaaatctcttctcctcctctttcgcac
atctctctcccgcaaaatcaacagcaacagcaacagcttagccctgcggttggattggac
taccagcagaagcctctacaggcgcagcagcagcagcagcagcagcagcagcaacaacag
cagcagcaacaacaacagcaacattcgcagcaattggtgcaacaacctcagaatgcgagt
gcgatgacgaatttccaaatccagcaagctttacagcggtcaccttcaatgtctcggttg
aaccaaatgcaaccgcagcagcagcaacagcagcagtttgggatgatgagacagcaatcg
gcgctttacagtcagatgaattttggtgcgtcttctacaaaccagcagcagcaacagcct
aaccaacaacagcaaataggaactgggagtctgtcgcggtctgcattaattggtcagggt
agccatttgcccatgttgtctggggcggctgctgctgctcagtataacttgcagtcacaa
ttacttgcttcgtcgaagcagaaagctggtttagtccagggggcgcaatttcagtcgggt
aactctcacgggcaagctttacaaggaatccaagcaatggggatgatgggttcaatgaat
ttgacctcgcagttaagagccaatggccttgcgtcgtcatatgcccaacagagaataaac
caaggccaaataaggcagcaattatcacaacaaagctcactcacgtctccacaggttcag
aacttaccgagaatgtcaaatctagcatttatgaatcaacaattgactaatttggctcag
aatgggcagtcaaacatgatccagaactctttgcaacagcaacagtggttaaagcaaatt
ccaacaatgtctacccctggctcaccctcatatcgtcttcaacagaggcaacaagtcctg
ctacagcagcaattggcttcatctagtcaattgcatcaaaaccccatgtccttgaactct
catcaatttcctcagcttgtacagcaacagccgtccataggacatcaacagcagcaacca
caggcacaacaacagcaaccacaacaacagcagctacaacagcagacccttcatcaacaa
cagcagctacttcaacaaccatcaccacagaattctctgcaaccagtattgcatcagcat
caacatcagcagcattctcctaggatagctggacttgtgggccagaaatctctcagtttg
actggatcacatccagatgctacagcgtctggcactagtacacctgggggaagttcaagc
caagggacagaagctgccactcaagtccttgggaagagaaagatacaagatctggtttca
caggtagatccacatggaaagctggaacctgaagttgaagatcttctcttggagattgcc
gatgattttattgactcggttactaccttttcatgcaatttggctaaacaccggaagtcc
tcaactttagaatccaaagatctcttgctacacttagagaagaattggcagttaaacatt
cctggatattcaagtgacgagcggaagaaccagaataaaagtttatcatcaagtgacgtc
cacaagaaacgtctggacatgatacgcatattgaaggaagcttcctgtgtcgaaacaaac
ataaacacccctaaagagatggtccgacaaggggttggaatgtccatcggtaccaacact
ctaacaaggccttcaccaagttcagaacaactattgtcacagacagccggttcacagctg
ctgcagcaaatgacgaggttttaa
DBGET
integrated database retrieval system
