Cucurbita maxima (winter squash): 111488614
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Entry
111488614 CDS
T05246
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111488614
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmax01009
]
111488614
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111488614
03036 Chromosome and associated proteins [BR:
cmax03036
]
111488614
Protein phosphatases and associated proteins [BR:
cmax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111488614
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111488614
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111488614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
111488614
NCBI-ProteinID:
XP_022992227
UniProt:
A0A6J1JP73
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MNGGNEVIAAPAAPPQPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDTKDHGASRRDLERMDNAISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQPANGALFLLSTNDKTIKYWKVQEKKVKKVSTMNVDPSKPVGNGSNASSSNSSSSG
PYLANGGSPDRYPSNDPSFPARGIQSLRLPVVTTHETNLVARCRRVYGHAHDYHINSISN
NSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYS
SSKGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKEGRYILSRDY
MTLKLWDINMDSGPVAAFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRLATGSYSNL
FRVFGCVSGSTEATTLEASKNPMRRQVQTPSRPARSLSSSITRVVRRAGSESPGVDANGN
SFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtggtaatgaggtcattgcagctccggccgccccgccacagccgctggactgg
aaattctctcaggtctttggggagcgtacagccggtgaagaagttcaggaagtcgatatc
atttcagcaattgaatttgataaaagtggggatcatcttgctactggtgaccgtggtggc
cgggtggtactctttgagaggacagataccaaagatcatggtgcatcaagaagggattta
gagaggatggataatgcaattagtaggcatcccgagtttcgttataagacagaatttcag
agtcatgagcctgagtttgactacctgaagagtttggaaattgaggaaaaaattaacaaa
atcagatggtgccagccagctaatggtgccttatttctcttatctactaatgataaaaca
atcaagtattggaaggtgcaagaaaagaaggtcaaaaaggtttccaccatgaatgtggat
ccttctaaacctgttggaaatggaagcaatgctagctcgagcaactcaagtagctctgga
ccatatcttgcaaatggaggatccccagaccgatatccgagtaatgacccttcatttcca
gcaaggggcatacaatcgctgcgcttaccagtggtaactacccacgagactaacctggtt
gcaagatgtcgaagagtgtatggccatgctcatgattatcacatcaactccatctccaat
aatagtgatggagaaacttttatatcagctgatgatctgcggataaatctttggaacttg
gaaattagcagtcaaagtttcaacattgttgatgtcaagcctgctaacatggaggatctg
actgaggtgataacgtctgcagagtttcatcctactcattgcaatatgttagcatacagc
agttcaaaaggatccatccgcctaattgatttgcggcagtcggcattatgtgattctcat
gccaaattatttgaggagcaggaagcacctggttctagatcctttttcactgagattatt
gcttcaatctctgatattaagtttggaaaggaaggaagatacattcttagtcgtgattac
atgactctcaagttgtgggatattaatatggattctggtccagttgcagcatttcaggtt
catgaatatttaagacctaagctctgtgacctttatgaaaatgattcaatcttcgataag
ttcgagtgttgtttgagtggagatggattgcgattagctacaggctcttacagtaattta
ttccgcgtgttcggctgtgtatcgggaagtacagaggctacaactttagaagctagcaaa
aatccaatgaggcgtcaagttcagaccccttcaaggcctgccagatctctaagcagtagt
ataacacgagttgtaagacgagcaggatcagagagccctggggttgatgcaaatggaaac
tcatttgatttcacaacaaagttactgcatttagcttggcacccaactgagaactcgatc
gcctgcgctgctgctaacagcttgtacatgtactatgcgtaa
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