Cucurbita maxima (winter squash): 111488934
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Entry
111488934 CDS
T05246
Name
(RefSeq) uncharacterized protein LOC111488934
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111488934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111488934
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111488934
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111488934
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111488934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
FKBP15
Motif
Other DBs
NCBI-GeneID:
111488934
NCBI-ProteinID:
XP_022992649
UniProt:
A0A6J1JY42
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MFRPPAASSQQLPNSSLANSANGLQNPIQIQHQNQALFCNPNAHLNNLHGNPVPNMPPPM
FQPGLMMNLQNPLMALPNNPLGASPFAPGHMGFANSAANFPAQGQFNMVPNVNQMNMNSC
LPPAQFFGQNMPNLVQQLTQNMGLSNGQFCLPFQNMNQHVIPGQMLNMSSQVPSHASYGA
PNQQAVPMPFQNPALSTIQPFGVNQTMHPVNQNPQNFTPQAMGGAGSNQLLGSAPPLQVN
STMPFNSPTQPQQTRNLQSPAFVGSQGNSSISDGGNGSNSFSNNLAHRNFTRNSNKGFQK
HQAHHMKNEKKKFGVPGGMKGKGFHNERRNKFGGGNSTEHVKDQKRSLSLVYTDQEILQW
REARRKNFPSSTNIQKKLTEKQTDCTLVDKEAQLLRQELKEILAKQAELGVEVAEIPQEY
LSYSEKCDDNKRHGDLSTMGEEAEGASTGKEKARNRFNKRRRPEKKNRSRKKGKPDKHLS
NKSPLKKRETTLYQKLLRADVKRDKSHMLQALRFMVMNSFFNEWPNKPLNFPSVIVKESG
SEIKVVDEKSLSTGSFNLQETNNSMVENTGRRGIASDNESDDDNSDNDEKFRGDGIPILE
EEEGEIID
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtcctccagcggcttcttcacaacagttacccaattcatctctcgcgaattcc
gccaatgggcttcaaaatcccattcaaattcaacaccaaaaccaggctcttttctgcaat
cctaacgctcacttgaacaatctccatggaaatcctgttccaaacatgcctccccccatg
tttcaaccaggattgatgatgaatttgcaaaaccctctaatggcgttgcctaataatcca
cttggtgcttccccgtttgctcccggacatatgggatttgcaaattctgctgccaatttt
ccggctcaggggcagttcaatatggtgccgaatgtgaatcagatgaatatgaactcgtgt
ttgcctccagcgcagttttttgggcagaacatgcccaatttggttcagcaattgactcag
aatatgggtttatctaatgggcagttctgtttgccgtttcaaaatatgaatcaacatgta
attcctggacagatgttgaatatgtcgtcgcaagttccttctcatgcttcatatggtgct
ccaaatcaacaagctgttccaatgccttttcagaatcctgccctctctacaattcagcct
tttggtgtcaatcagacaatgcaccctgttaaccaaaatccccaaaacttcactccacaa
gcaatgggtggtgctggatcaaatcaattgctgggttcagctccaccgttgcaagtgaac
tcgaccatgccgttcaactctccgacgcaaccacaacaaacgaggaacctgcagtcacct
gctttcgttggttcacaggggaattcttcaataagtgatggtggaaatggatcaaattcc
ttttcaaataatttagctcacaggaatttcacgaggaactcaaacaaaggatttcagaag
catcaagctcatcatatgaaaaatgaaaagaaaaagtttggggttcctggcggaatgaaa
ggaaaaggttttcacaatgagaggaggaacaaatttggtggtggaaactccacagaacat
gtgaaagaccagaagagatctctttctttggtctatacggatcaagaaatcctgcaatgg
cgtgaagcacgccggaagaatttcccatcatcaaccaacatacagaagaaactcaccgaa
aagcaaaccgactgcacattggttgataaggaggctcagcttttgcgacaagaactcaaa
gagattttagcaaagcaggctgaattaggagttgaagtagcagaaataccacaggaatat
ctttcatattcagagaaatgtgacgataataaacgacatggagatctatcgacaatggga
gaggaagcagaaggagcctcaacagggaaagaaaaagctcgaaacaggttcaacaagagg
cgaagacctgagaaaaagaaccgttcgagaaagaaagggaaacccgataagcatttatca
aacaagtcgccattaaagaagagagagacaacattataccagaagctgttgagagcagat
gttaagagagacaaaagccatatgttacaagctttgagattcatggtgatgaattctttc
ttcaatgaatggcccaataaacccttgaactttccttcagtcattgtcaaagagagtgga
agtgagatcaaggtggttgatgagaagtctctatctactgggagcttcaatctccaagag
accaacaattcaatggttgaaaacactggtcgtcgtggcattgccagcgataacgaaagc
gatgatgacaatagcgataacgatgagaagttcagaggagatggaataccgatactcgaa
gaggaagaaggtgaaattatcgattaa
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