Cucurbita maxima (winter squash): 111489426
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Entry
111489426 CDS
T05246
Name
(RefSeq) cleavage stimulating factor 64-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111489426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111489426
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111489426
U7-dependent histone pre-mRNA processing factors
111489426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
111489426
NCBI-ProteinID:
XP_022993389
UniProt:
A0A6J1K017
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MASSQHRCVFVGNIPYDATEEQLIEICQEAGPVVSFRLVIDRETGKPKGYGFCEYKDEET
ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGHGGPGLVANSGGPTALGESGQHQP
IGLHIAITAAAIMAGALGGAQAASNQNILQNATISNDPLTLHLAKLSRSQLTEVMSGLKV
MATQNKDLAHQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPSHEIQQG
QPPSLQIQQGLPPLAPNRMQTGFVPKKETQMSLTPQNPSAPHQSSASQWPPFQSQIQPSH
VLQGTLTGIPGGSSLPSISLQGNISVRQQIQVPISSSLKQHIHPPSQQYSGHGQALIPGH
NAHIADPEAKPSLLPHPSLSDADFQPGPSTANSTSQIVGSDIDKSSLVPLGVDGKRNMLH
GFSGTTDRPVKQIKLEDGKGIPFSPGGLSASIGTNGSGQLGIASDPNLAGTHISEKPTSV
LPHNAESVLLQQVLSLTPEQLNSLPLEQRRQVIELQQALRRDQMRPS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctcagcatcgctgtgttttcgtcgggaatataccttatgatgctactgaa
gagcagcttatagaaatctgccaagaagctgggcccgtagtatcgttcagattagttatt
gacagagaaactggaaaaccaaaaggctatggattttgcgagtacaaggatgaagaaaca
gctttgagtgctcgtcgtaatcttcaaggttatgaaattaatggtcggcagttacgagtt
gattttgctgagaatgacaagggtgccgacagaaatagagaacagggtcatggtggacct
ggattggttgcaaattctggtggcccaacagcccttggggaatccggtcaacatcaacca
attggtcttcatatagcaataactgctgcagctatcatggcgggagcccttgggggtgca
caggctgcttctaatcagaatattttgcagaatgcaacaatttccaatgatcctttaact
ttacatctggctaaactttctaggagtcagcttactgaagttatgtcaggactaaaggta
atggctacccaaaacaaggacttggctcatcagctgttgctggcaagaccacaattatca
aaagctcttttccagtcacagataatgcttggaatggtcactccacaagtgttgcagaag
cctaatttacgtcaaccttctactcatcctcagcttccttcgcatgaaattcagcagggt
cagccaccatctcttcaaattcaacaagggttgccccctcttgcacctaacaggatgcag
actggttttgtacctaaaaaagaaactcaaatgtctctcacgcctcaaaatccttctgct
ccccatcagtcttctgcatcccaatggcctccatttcagtctcaaattcagccatcacac
gttttacaaggcactttgaccggaatacctggaggctcatcacttccttccataagttta
cagggaaatatatctgttaggcaacagattcaggtgcccatctcctcttctttaaagcag
cacattcatcctccttctcaacaatattcagggcatggccaggctctaattccagggcat
aatgctcatattgctgatccagaagcaaaaccttctcttttgcctcacccttctttatca
gatgcagactttcagcctggcccctccacagcgaatagtacatctcagatagtgggcagt
gatattgataagtcttctctagttcctcttggtgtggatggtaaaagaaatatgcttcat
ggcttttcaggaacaactgatcgccctgtaaagcaaataaaattagaggatggaaagggc
attcctttctcccccggaggtctgagtgcatcaataggtaccaatggatctggacagctt
ggaattgcctcagatcccaatctggcgggaacgcatatctctgagaaaccaacttcagtg
cttccccacaacgccgagtcggtactactgcaacaagttttgagtctaactcccgaacag
cttaactcgttgccactcgaacagagacgacaagttattgagcttcagcaagcacttcga
agagatcaaatgcgaccatcttag
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