KEGG   Cucurbita maxima (winter squash): 111490011
Entry
111490011         CDS       T05246                                 
Name
(RefSeq) autophagy-related protein 8C-like
  KO
K08341  GABA(A) receptor-associated protein
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax04136  Autophagy - other
cmax04145  Phagocytosis
cmax04156  Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    111490011
   04136 Autophagy - other
    111490011
  09143 Cell growth and death
   04156 Integrated stress response (ISR) signaling pathway
    111490011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmax04131]
    111490011
   04121 Ubiquitin system [BR:cmax04121]
    111490011
   03029 Mitochondrial biogenesis [BR:cmax03029]
    111490011
Membrane trafficking [BR:cmax04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    111490011
Ubiquitin system [BR:cmax04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   111490011
Mitochondrial biogenesis [BR:cmax03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    111490011
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 111490011
NCBI-ProteinID: XP_022994202
UniProt: A0A6J1JV40
LinkDB
Position
Unknown
AA seq 118 aa
MAKSSFKLEHPLERRQAEASRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSSEKAIFIFIQNTLPPTAALMSSIYEDNKDEDGFLYMTYSGENTFGF
NT seq 357 nt   +upstreamnt  +downstreamnt
atggccaaaagctcgttcaagctcgaacatcctctagaaaggagacaagcagaagcttct
cgcatcagggagaaatatccggacagaattcccgtgattgtggagaaagctgaaaggagt
gacattcctgacattgataagaagaagtaccttgtcccagctgaccttacggttggtcag
tttgtttatgttgtccggaaaaggattaagcttagttccgagaaggctattttcatcttt
atccaaaacacactacctccaactgctgctttgatgtcatcaatctatgaagataacaag
gatgaagatggttttctttacatgacttacagtggagagaacacctttggattctga

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