Cucurbita maxima (winter squash): 111490046
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Entry
111490046 CDS
T05246
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111490046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111490046
03012 Translation factors [BR:
cmax03012
]
111490046
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111490046
Translation factors [BR:
cmax03012
]
Eukaryotic type
Release factors
111490046
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
WDR18_C
Motif
Other DBs
NCBI-GeneID:
111490046
NCBI-ProteinID:
XP_022994257
UniProt:
A0A6J1JVA4
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MDIEEDIRALELDSPDVNGVPKPDEKMEDIVKSDNVEEDAKTEDIEKSDKMEEEWTEDHP
QSAQDIHVEEQVEESISAKEKEVSSTVNEDEGDLETDRKRHLNVVFIGHVDAGKSTIGGQ
ILFLSNQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTR
FTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVA
KLLVVVNKMDEPTVKWSKERYEEIESKMAPFLKSSGYNVKKDVQFLPISGLHGINMKARV
DKKVCPWWNGPCLFEILDTIEGPPRNPKDPFRMPIIDKFKDMGTTVMGKVESGTVREGDS
LWVMPNKTQVKVATVMCDENKVKWAGPGENLRVRITGIEEEEITSGFVLSSVAKPIAAVS
EFVAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIIELLHQIDPKTRKPMKKKVLFVKN
GAVILCRIQVNNLICIEKFSDFPQLGRFTLRTEGKTVAVGKVTDIPAATN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggaggatattcgtgcattagaacttgattcaccagatgttaatggtgtt
cctaaaccagatgaaaagatggaagatattgtgaaatccgacaatgttgaagaagatgca
aagacagaagatattgagaagtccgataaaatggaagaagagtggacagaggaccatcct
caatcggcccaagatatccacgttgaagaacaagtggaggagagcatatctgcaaaggag
aaggaagtttcttcgactgtaaatgaggatgaaggggatttggaaacggatcgcaaaaga
cacttgaacgttgtgttcattggtcatgttgatgctggtaagtctacaattggtggtcag
atacttttccttagcaatcaggttgacgagcgtacgatccaaaagtatgaaaaagaagca
aaggataaaagcagagaaagctggtatatggcatatatcatggacacaaatgaagaggag
agagtcaaggggaaaactgttgaagtgggaagagcacattttgaaactgagaccacaagg
tttacaattttggatgctccaggtcacaaaagttatgtcccaaatatgatcagtggggca
tctcaagctgatataggggttctggtaatttctgctaggaaaggagagtttgaaactgga
tacgagagaggtggacaaactcgtgagcatgttttgctggcaaaaacattgggtgttgcg
aagcttctcgttgtagtgaataagatggatgaacccacagtcaaatggtccaaagaaagg
tatgaggagatagagtctaagatggcacccttcttaaagtcatctggttacaatgtaaag
aaagatgtccaatttttacctatatctggtcttcatggtattaacatgaaagcaagagtg
gataagaaagtatgcccgtggtggaatggtccgtgcttgtttgaaatccttgatacgatt
gaaggtccaccaagaaatccaaaagatccatttaggatgcccatcatcgacaaattcaag
gacatgggaacgactgtcatgggtaaagttgaatctggcactgtgcgtgagggtgattcc
ttatgggtaatgccaaataagactcaggtgaaagttgctactgtgatgtgtgatgaaaat
aaagttaagtgggcaggacctggcgaaaatcttcgtgttagaataactggaattgaagaa
gaagaaataacgtctgggtttgtactatcaagcgttgcaaaaccaatagccgctgtttct
gagtttgttgcgcagttgcagattcttgagctgctggataatgcaatatttacagctgga
tataaggccgtacttcacattcatgctgttgttgaagaatgtgagatcatagagctgcta
catcagattgatccgaagactaggaaacccatgaaaaagaaagttctctttgtaaaaaat
ggtgcagttattttgtgccgcatccaggtcaataacttgatctgtattgagaagttctct
gattttcctcagcttggaagatttacacttcggactgaagggaagacagttgccgtagga
aaggtcactgatattccggctgcaaccaattaa
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