Cucurbita maxima (winter squash): 111490125
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Entry
111490125 CDS
T05246
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111490125
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
111490125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
111490125
NCBI-ProteinID:
XP_022994395
UniProt:
A0A6J1K132
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSNVGETMALAVCSDKNMGSGITIWDPKTGETLLHIPTCASPSYGLISLRNEFLVASQTR
KEGSVGGGSMFVWSLSKPQSPLRSYPLEPIGPLASTKDGVYLAGGAHSGNIHLWEVGSGK
LLKLWSGHHKPIKFILFSWDDSFLITGSADGMIFVWSMISLLDVELVGSAQPILYSLMEH
KSSLTGLITMSGYSMSMIISSSLDGSLKFWDLMSGMIRGTQAHVEGITEIVLHPTEQFLF
SGTVDGKIFASRLEFGLDNCITIKESQLFASTGHKGAITALAFSLMDLVSASEDCTVCIW
DINSQMIIQKLEHKKGRITNLVAVPRSSLLISTSNRKRVLKQFDKYPQPANLSTSTIPLF
PSSRPLGENPNLIGFTSAGSLNQQIFDMKTEGTSAAIQMKVDTRLQSRMWASRMTKQVME
MNNHLQSQLLDMMQTRLFPKKRKDQRDRVARTREKHPLSFH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgttggcgaaacaatggcgttggctgtgtgcagcgacaagaacatgggatca
gggattacgatttgggatccgaaaacaggcgaaactctccttcacattccgacttgcgct
tcgccttcttatggtttaatttccttgagaaacgagttccttgttgcttctcagactcgt
aaggaagggtccgttggtggtggatccatgttcgtttggtccctgagcaagccgcagtcc
cctcttaggagctatccattggagcctattggaccacttgcctcaacaaaggacggtgta
tatcttgcaggcggagctcattccggtaatattcatctctgggaggttggtagtggtaaa
ttgcttaagctttggagtgggcatcataagcccataaaattcatcctgttttcttgggac
gattcgtttctcattactggttcggccgatggaatgatttttgtgtggtccatgattagt
ttgctggatgtggaacttgtgggaagcgcacagccaatattatacagtctcatggaacat
aagtcgtctttaactggtctaattactatgtctggctactcgatgtcgatgatcatttca
agctccctcgatggcagtttaaagttttgggatttaatgtcgggaatgattcggggaact
caagctcatgtagagggaatcactgagattgttcttcatccaactgagcaatttctgttc
tctgggactgttgatgggaaaatttttgctagcaggcttgaatttggattggataactgc
attaccattaaagaaagccaattatttgcatcaacaggacacaagggagctattactgct
ctggccttcagtctaatggatctagtttctgcatccgaggattgcacagtctgcatatgg
gacatcaatagtcagatgatcattcaaaagcttgaacacaagaaagggagaataaccaac
ttggtagcagttccacggtcgtcgctgctgatctctacgtcaaaccgtaagagagtcttg
aaacagttcgacaagtatccccagccagccaacttgtcgacgagcacaatacctctcttt
ccctcttcccgacccctcggggagaatccaaatctcattggattcacaagtgccggttca
ctgaatcagcaaatatttgatatgaagacagaagggacatcggcagcaatacagatgaaa
gtcgatacacgtttacaaagccgaatgtgggcgtctagaatgacgaagcaagttatggag
atgaacaaccatcttcaatcacagttgcttgacatgatgcagactcgtttattcccgaag
aaacgaaaagatcaaagagatcgagtcgctcggactagggagaagcatccattgtcattc
cattga
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