Cucurbita maxima (winter squash): 111490480
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Entry
111490480 CDS
T05246
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111490480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111490480
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111490480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
111490480
NCBI-ProteinID:
XP_022994892
UniProt:
A0A6J1K467
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MVKRRLYEFKHPFNDYPFEAICCGSWQAAEKIRIRNGSITLHLVNDQFMILERGPYTDFR
IRSRQATSSDCTCFLRPGVDICVLSSSRSTENTDVQGSEPVWIDAKISSIERKPHDSGCS
CQFYVQLYAADKKPLGSEKGSLCKEIIAMGIDQIFVLQKVRKHFCEGQHYRWDFSEDCAL
LPKTKLLLGKFLSDLSWLVVTSALKHVTFDVRSVDNKILYQVLESNQKGTSVASDKILNV
VNFRNDEGMFIPIIHQLNSSDRIEMSPADDAFDSQLHSFTDLMDLRRSKRRNVQPDRFLG
CDSINESEIDYSGTRIYKTEQLNDDDEMTLPLAYLFATNAGPSKVKMENESNNHFNQLSV
RDDLSDFKSRLRSLEMSDEVEDKNQLAIVPVIDEQPIASDPYPDDANGCGNFTKQITEMS
ARYYYINNKRKVRKRNSSDFEDENFENGSWGKALSSKGRKTRYHSICYKEDGSPKERTWQ
KRSLGAGAYKDLINSFLKNIDSTIQKEEPQIIDQWKEFKNKTSLDKRNEMELPSNEEKEE
NSEIEMLWREMEISLASSYLIDANQGFSNGTSVEPEQKESKWCQHEFKLNEEIGMLCHIC
GFVSTEIKDVSAPFMQHMSWNSEERRIEEKDEHNTDDEEEMNIFCGLPSSDGTLSEENDN
VWALIPEFRRKLHLHQKKAFEFLWKNVAGSMVPALMDQASRKIGGCVISHTPGAGKTFLI
ISFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEVPVPIHLIHGRRTYRVFRSNSKPV
TFAGGPRPTDDVMHILDCLEKIKKWHAHPSVLVMGYTSFLTLMREDAKFAHRKYMAKVLR
QSPGILILDEGHNPRSTKSRLRKVLMKVETDLRILLSGTLFQNNFCEYFNTLCLARPRFV
NEVLKKLDPKFKRKKRKAPHLQEARARKFFLDKIARKIDAGDGEERQEGLNMLRNMTSAF
IDVYEGGSKDGLPGLQIYTLLMNTTDIQQQILNKLHKIMAKYPGYPLELELLITLGSIHP
WLVKTAVCASKFFSERDLMELEGYKFDLRKGSKVMFVLNLVYRVVKKEKILIFCHNIAPV
KLFIELFENVFRWKRGREILALTGDLELFERGKVMDKFEDPLGPSKVLLASITACAEGIS
LTAASRVILLDSEWNPSKTKQAIARAFRPGQLKVVYVYQLLVTGTLEEDKHKRTTWKEWV
SSMIFSEAFVEDPSKWQAEKIEDEVLREMVEEDRVKSFHMIMKNEKASTVIREKD
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaagacgtttatatgaattcaagcatccattcaatgattaccctttcgaggcg
atatgctgtggttcttggcaagctgcagagaaaataagaattaggaatggttcaatcacc
cttcatttagtgaatgatcagttcatgattctggaaagaggtccttacacagacttccgc
attaggtcgagacaagcgacttcatctgactgcacctgttttctacgacctggtgttgat
atttgtgtcctctcttcctctcgcagcacggagaatactgatgtgcaaggttcagagcct
gtgtggatcgatgctaaaataagctcaattgagcggaagcctcatgattctgggtgttca
tgccagttttatgtccagttatatgctgctgataaaaaaccccttggttcagagaaggga
tcgctttgtaaagaaatcatagcaatgggaattgatcagatctttgtacttcaaaaggtt
aggaaacacttctgtgaaggtcaacactaccgatgggatttctctgaggactgcgctctg
ttgccaaaaacgaaactgcttctgggaaaatttctgtccgatctttcttggttagtagta
acatcagcattgaaacatgtcacttttgatgtaagatcagtggataacaagatcttgtac
caagtgttggaaagtaatcagaagggcacttcagtagcttctgacaagattttaaacgtt
gtaaactttagaaatgatgaaggtatgtttattccaataatacatcagctaaattcatct
gataggattgagatgtctcctgcagatgatgcatttgacagtcaattgcactcatttact
gatcttatggacttgaggcgttcaaaacgccgtaatgtccaacccgatcgttttcttggc
tgtgatagtatcaatgaatcagaaattgactacagcggaaccaggatatataaaacagag
caattgaatgatgatgatgagatgacattaccacttgcttacctgtttgccacgaatgca
ggtccttcaaaagtaaagatggaaaatgaaagcaacaatcatttcaatcaattgagtgta
cgtgatgatctctctgatttcaagagcagactaagatcattggaaatgagtgatgaagta
gaagataaaaatcaacttgctatagttcctgtaattgatgaacagccaatagcatctgat
ccatatcctgatgatgccaatggttgtggtaactttacgaaacagattactgaaatgtca
gctaggtattactacattaacaataaacgcaaagtccggaaaagaaactcttcagacttt
gaagacgagaactttgagaatggtagctggggaaaggctttgagtagtaaaggtaggaag
accaggtatcattccatatgttataaagaggatggttctcctaaagaaagaacttggcag
aaacggtccttaggtgcaggtgcatacaaggatttgatcaattccttcctgaagaatatt
gactcaacaattcaaaaagaagagccacagataattgatcaatggaaagaatttaagaac
aaaacttccttggataagaggaacgagatggaactgccctctaatgaggagaaggaagaa
aactctgagattgaaatgctgtggagagagatggaaatatcccttgcctcaagttacctt
attgatgctaaccagggttttagtaatggaacatcagtggagcccgaacagaaagaaagc
aaatggtgccagcatgagttcaagttgaatgaagagatagggatgctctgccatatatgt
ggctttgtgagcactgaaattaaagatgtctcagcaccatttatgcaacacatgagctgg
aattccgaagagcggaggattgaagaaaaagatgagcacaatactgacgatgaggaggag
atgaatattttctgtggcctgccttcttctgatggtaccttatcggaagaaaatgacaat
gtctgggccttgatccctgaattcagaaggaaattacatctccaccaaaaaaaagcattc
gagttcctgtggaaaaatgttgctggttctatggttccagctctcatggatcaagcatct
cgtaaaataggtggttgtgtgatatcccatacaccaggagctggaaaaacctttctgatc
atctcattcctcgttagttacttgaaactgtttccagggaaaaggccccttgtccttgct
ccaaagactactctttatacatggtataaggaatttattaagtgggaagttccagtacca
attcatctaatacatggtcgtagaacctaccgagttttccggtcgaactcaaaaccagtc
acgtttgctggaggtccaaggccgacagatgatgtcatgcacatcttggattgcttggaa
aagataaagaagtggcatgcacatccaagtgttcttgttatgggctatacatcatttctt
acattaatgagggaagatgcaaaatttgctcacagaaagtatatggccaaagttttgcgc
caaagccccggtatcctaatattggacgaggggcataaccccaggagtactaagtccagg
ctgaggaaggttttgatgaaagttgaaacagacctcagaatactcctctcaggtaccttg
tttcaaaataatttctgtgaatatttcaatactctttgtttggcaagacctaggtttgtg
aatgaagtgttgaagaaactagatcccaaattcaagaggaaaaaaagaaaagctccacac
ctgcaggaagctcgggcaaggaaattctttttagataagatagctcggaaaatcgatgca
ggtgatggagaagagaggcaggaaggtctgaacatgctaagaaatatgacaagtgcgttt
attgatgtttatgaaggtggaagtaaggatggccttcctggtttacaaatttacacctta
ctaatgaacacaactgacatacagcaacaaattttgaataaacttcataagataatggct
aaataccctggatatccccttgagttagagctcctcataactcttggttcaatccatcct
tggttagtaaaaactgcggtttgtgctagcaaatttttcagtgagagggatctgatggaa
ctagaaggatacaaatttgatttgaggaaaggttcaaaggtgatgtttgttctgaatctt
gtgtaccgtgtcgtcaagaaggaaaaaattctaatcttctgccacaacattgcacccgtc
aaactattcatagagctgtttgagaacgtatttaggtggaagagaggccgagaaatcttg
gccctcacaggggaccttgagctattcgaacgaggaaaagtgatggataagtttgaagat
cccttagggccatccaaagtcttgcttgcttcaattactgcttgcgcagaaggcattagt
ttgactgcagcttcacgagtcatcttactagactccgagtggaatccttcgaagacaaag
caggccatcgctcgagctttccgtccaggccagcttaaggtggtctatgtctatcaacta
ctggtaactggcacattggaagaggacaagcacaagagaactacatggaaggaatgggtg
tcaagtatgattttcagtgaggcgtttgtggaggatccttctaaatggcaagcagaaaag
attgaagatgaagttcttagggagatggtggaggaagatagagtcaaatcgtttcatatg
attatgaaaaacgagaaggcttctactgtgatcagagagaaggattag
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