Cucurbita maxima (winter squash): 111491040
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Entry
111491040 CDS
T05246
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111491040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111491040
03036 Chromosome and associated proteins [BR:
cmax03036
]
111491040
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111491040
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111491040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
111491040
NCBI-ProteinID:
XP_022995534
UniProt:
A0A6J1K642
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MFGSPNPFGQPSSSPFGSQPVFGQTANASNNPFAPKPFGSTSPFGSQAGNSVFGGTATGV
FGAAQSSSPFASSTTTFGGSSSPAFGAPTFGSTSTPAFGSSSSSSFGGSSIFGQKPLFGG
FGSTPAQTNPFGSANQQSQPAFGSTSQQSQPAFGSNVFGSSPFGAPSQPAFGATSSPAFG
TTSTPAFGATSSAPAFGTTSTPAFGATSTPAFGATSTPAFGAASTPAFGATSTPAFGSTS
TPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSPSFSFG
STPAFGQSTSAFGSSTFGTNTSPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGGSRVTP
YAPTTEPDSGSGSTQAAGKLESISAMPSYKDKSHEELRWEDYQLGDKGGPLPAGQSTGGV
GFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSSAFAPS
SSSNPFASTTAASTSSSFLSSTSQFGSSSLFGSSNAQPLASQPAFSSTTSPGTNLTFPSS
LNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGGNLFSSSPSLLSSNPM
GFGQSSASFSMPFQQAQAQGPTSFFSNLGQTQPIGSSSFAGTSSIFGQSIFGQSPITQNP
IVQPAPATNPFGTLPAMPQMSISRPGAAPSIQYGISSMPVVDKAAPVRISSFLTPRHLSH
RRMRLPARKYNPKNDGHPRVPFFSEDEETPSTPKADALFIPRENPRALVIRPTDQWPSRA
SSERVLPSKDTSVRENGKIAEGTSSMVVNNLKDTNGNVVENGTSKDNIHPNKVNKKPNGV
HEDHSAPKEDFYRTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKMQELAAKERA
EPGFCRHVEDFVVGRHGFGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPRGQG
LNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSHDPVKGEWKFR
VEHFSRYNMEDNEEVEDWE
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttctcccaacccttttgggcaaccgtctagtagcccgtttggatctcaacca
gtctttgggcaaactgccaacgcaagtaataatccttttgcacctaagcccttcggcagt
acatcaccatttggctcacaggcaggaaattcagtgtttggtggtacagcaacaggtgtg
tttggggcagcccagtcttcttccccctttgcttcttcaaccacaacatttggtggttcc
tcatcgccggcttttggagctcccacttttggatcaacatcaactcctgcttttggtagt
tcatcgtcttcatcatttggaggttcctccatttttgggcagaagcccctgtttggaggc
tttggatctactcctgcccaaacaaatccatttggaagcgcaaaccagcaatctcagcca
gcatttggaagcacaagccagcaatctcagccagcatttggaagcaatgtctttggttca
tcaccttttggtgctcctagtcagcctgcatttggagctactagctctcctgcctttggc
acgacaagtactcctgcctttggtgccacaagcagcgccccagcatttggcaccacgagt
accccggcatttggtgccacaagcacgccagcctttggcgccacaagcacccctgcattt
ggcgctgccagcaccccagccttcggcgctacaagcactcctgcctttggttctacaagc
actcctgcatttggtagtactgggagttcatttggttcattaagcacccctgtttttgga
tctggaggtggatttggtgcttctagtactcctacttttggagtttctagtacgcctgct
tttggggcttcaagtactcctgcttttggagcttctagcagtccatcctttagctttggg
tccactcctgcttttggccagtccacttctgcatttggtagcagcacttttggcactaat
acatctccttttggagcgcagagttctccctttggagcacagtccactactacgtttggg
actagtggttttgggcaggcaggttttggtggacagcgtgggggcagtagagtaactcca
tatgcaccaacaactgagccagattctggaagtggcagtactcaagcagctggaaagttg
gagtctatatcagccatgccttcttacaaagataaaagtcacgaagagttgagatgggag
gattatcaattgggagacaaaggaggacctcttcctgctggtcagtctactggtggtgtt
ggctttggtgtctctactgcacagcctaaccttctagcttcttcaacatttagtcaatca
agttcaaatcctttttctacagccgcatctaccaatccatttgcacctaaaccttctggt
tttggcacttttggaccttcaacgacattttcatttaattcttcagcatttgctccatcc
tcttcatcaaacccatttgcatcaacgactgcagcatcaacatcatcatcttttctatca
tcaacctctcaatttggaagctcatccttattcggttcatctaacgctcaaccccttgcc
tcacaacctgcttttagttcaactacatctcctggaacaaatcttacttttccttccagc
ttaaattttagtaacacccaatcatcttcccttttccaatccacagcaccttcaattggg
cagacgggttcagcctttggtgctcccttttcacaacccagcttgtttagtcaaccttcg
tctggggttggagggaaccttttctcaagctcgccatcactcctatcaagcaatccaatg
ggttttggtcaatcatctgcctctttctctatgccttttcaacaggcacaggcacaggga
cccacttccttttttagcaacctgggtcagactcaaccaattggttcaagtagttttgct
ggaacttcaagcatttttgggcagagtatctttggacaatcgcctatcactcaaaacccc
atcgtacaaccagcaccggccacaaatccatttgggacactccctgcaatgccacagatg
tcaattagtagaccaggggcagcaccttctattcaatatggaatttccagcatgccggtt
gttgataaagctgctcctgtgagaatatcatccttcttgacaccccgccacctgtctcac
cgacgaatgagattgcctgcaagaaaatataatcctaagaatgatggccacccaagggtt
ccattcttcagtgaagatgaagagacaccaagcactccaaaggcggatgctctttttatt
ccgagagagaaccctagagcattggttattcgtcccacagatcagtggccttcaagggcc
agttcagagagagtattgccatcgaaggatacctcagtgcgtgaaaatggtaagattgct
gaaggcacttcctccatggttgtcaacaatttgaaggataccaatggaaatgttgttgag
aatggtactagcaaagacaacatccatcctaacaaagtaaataaaaaacccaatggggtt
catgaggatcactctgccccaaaggaggatttttacaggacttttggagggcatagagct
ggtgaggccgccattgtttatgaacatggggcagatattgaagcattaatgccaaagctt
cggcattcagactattatacagagccaaagatgcaagaattagctgccaaagaaagggcc
gaacctgggttttgccgtcatgttgaagattttgtggtgggtcgccatggttttggaagc
atcaaattctttggtgagaccgacgtgcgaaggcttgatttggagtccattgtccagttt
aacaaccgtgaggtgattgtctacttggacgagagtaaaaagccccctcgtgggcaaggt
ctgaataaacctgctgaagtaacaatactcaacatcaaatgcttcgacaagaaaaccggg
catcaatatactgaagggcctaaagttgagaagtataaggagttgttaaggaagaagacg
gaggctcaaggcgctgagtttgtatcccacgacccagtgaaaggggaatggaagttcagg
gttgaacacttcagccggtacaacatggaagacaatgaagaagttgaagattgggaatga
DBGET
integrated database retrieval system
