Cucurbita maxima (winter squash): 111491051
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Entry
111491051 CDS
T05246
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111491051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111491051
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111491051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
111491051
NCBI-ProteinID:
XP_022995551
UniProt:
A0A6J1K282
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MVDSVAKRTRLRRAMAREEHLEQRKKRRKKSRDSASNNVRGQFSSGGFRDRGKWVNASEN
CSVNRRMEVEKVAISVDSKEESVEEIDAVTFGREGGDSVTFVGSESSGLKNVKGFGMKGN
VDVIDLENEVIFLDEEEGFDSVNSNCSISKSAAAAAKGGDFTCLDLDNEDGSSGLISSGK
GKGALEISPNKSMGESNCLNSNGFESGGCSYSTEPACCPDDAVDESTESGASSNEEKSDE
LSDENYELEESEESISESSSSSENVENNGSCCVEAGSRRERMESRKRMKVIEGGLKRCKA
YGLDILSDLDKDGHNFDYENGNAKVREQQVNCVARRTRSRYVWKVKKINNDLGTVSQPLC
IDEEGSDFEGNEKEIHSSSRHDSGDSCDSDNDSDNDSDSDSDSDRGHGRARDRDRGRGRG
RGRGRGRDSVRDHDRDRTADDGIYKPRAWSSGIKKRTQFNNQSDDVILSEKNDDHTNKVE
NFHGGSKLWDSKSSPETDKHKRSEDCEDFQKVHPKNFHEFDSIIKTKGHSACKNLDVFNI
LVDSIVADKELPSDDLDSRTSPLSHCPEMPLPLKFNFRFEEPHLPERLEEEKEMDKLWAE
LDFALRSSEIGAVDSITVENEDAFLSKLDQADLCLRGDHQLILDEQIGLRCTRCSYVKLE
IKDILPSFGTNPSGKSHKRESGSFEHVRFDDLQQEFDRDPHDISDSQYHVGRTVWDIIPG
IRESMYPHQREGFEFIWENIAGGIYLDELRNINSSNNGSGCIVSHAPGTGKTRLTIVFLQ
TYMELNPTCRPIIIAPSSMLLTWEEEFLKWKVGIPFHNLNKRDFTLKENFSALKFLMQAS
PSGQTVENVRLVKLLSWKKEKSILGVSYRLFERLAGVRKNTKCDKVRNVLLELPGLVVFD
EGHIPRNDDSLIWMALSKIKTERRIILSGTPFQNNFTEFSNTLRLARPNFADACKSGGNE
CPDKKRGRPKHISRGKWDLLISSIDRTENLPESPELREIRALISPFVHVYRGNILREKLP
GLRKSIVILRPAELQKSYLESIVGNNSFEVEYAESLISVHPSLKLKCDKEDFDIDKEMLE
KVRLNPELGVKIQFLLEIIRLSEALNEKVLVFSQYIEPLSFIDENLKFHFNWNEGVEVFH
MDGKRDIKKRQALINTFNDPTSEVRVLLASTKACSEGINLVGASRVVLLDVVWNPSVERQ
AVCRAFRLGQKKVVYVYHLIASGTREEEKYSRQMKKDRLSELVFSPEQGSNQVKVSSTDL
DDRILEAVLQHEKLKNIFEKIAYQSKQSSMNGNFGPAD
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggtggactccgtagcgaagagaacgaggctgaggcgagcaatggctagagaggagcat
ttggagcagaggaagaaacgtaggaagaagagcagggattccgctagtaacaatgttcga
ggtcaattttcgagcggaggatttcgtgatcgaggcaagtgggttaatgcttctgaaaat
tgtagtgttaatcgtcgaatggaggtagaaaaagtggctataagtgttgatagcaaggag
gagagcgtcgaggagattgatgctgttacgtttggtagagaaggtggggattcggtcaca
tttgtaggttctgagagttcggggttgaagaatgtgaaaggatttggtatgaaagggaat
gttgatgtaatcgatttagagaatgaggtgatttttcttgacgaggaggagggttttgat
tctgtgaattcgaactgttcgatttctaagtcagctgctgctgctgcgaagggcggggat
ttcacttgccttgatttggataacgaagatggtagtagtggcttgatttcatctggcaag
ggaaagggtgctttagagatatctccaaataaaagcatgggagaaagtaattgcttgaat
tctaatggctttgagagtggaggttgctcgtacagcactgagcccgcgtgttgtcctgat
gatgctgtagatgagtccactgaatcgggagcatcatcaaacgaagagaagtctgatgaa
ttgagtgacgagaattatgaattagaagaatcagaagagtcaatttcagagtcctctagt
agttcagaaaacgtggaaaataatggaagttgctgtgtagaagcaggaagtagaagggaa
agaatggaaagcaggaagaggatgaaagttattgaaggtggactaaagaggtgtaaagct
tatggattggacatattgtctgatcttgacaaggacggtcataactttgattatgaaaat
ggaaatgctaaggttcgtgagcagcaggtgaattgtgttgcacgaagaacccgttcacgc
tacgtttggaaggttaaaaagataaataatgatcttggaactgtcagtcagccactctgt
attgatgaggaagggtcagactttgagggcaatgagaaagaaatacattcttcgtcaagg
catgacagtggagattcttgtgatagtgacaatgacagcgataacgatagcgatagcgat
agcgatagtgatcgtggtcatggtcgagctcgtgatcgtgatcgtggtcgtggtcgtggt
cgtggtcgtggtcgaggtcgtgatagtgttcgtgatcatgatcgtgatcgtactgctgat
gatggaatttacaagccaagagcctggagtagtggtattaaaaagagaactcagttcaac
aatcaaagtgatgatgttatcttatcagaaaaaaatgatgatcatacaaacaaggttgag
aattttcatgggggtagtaaactttgggatagtaaaagttctcctgaaacagataaacac
aaacggagtgaagactgtgaagattttcagaaggttcacccaaagaatttccatgagttt
gatagtattatcaaaacaaaaggccacagtgcctgcaaaaatcttgatgttttcaatatt
cttgtagattccatagttgcagacaaagaactgccttcagatgatttagattctcgtaca
agtccactctcccattgtcctgagatgcctcttcctttgaagttcaattttagatttgag
gaaccacatcttccagagaggttagaggaagaaaaagaaatggataaactgtgggctgag
cttgactttgctctcagatccagcgagattggtgcggtggattctattacagttgaaaat
gaagatgcctttctttcaaagcttgaccaagcggatctttgtcttcgtggggatcatcag
ctgatacttgatgaacaaatcggacttagatgcacacgttgttcatatgtcaaattggaa
atcaaagatattctaccttcttttggtacaaatccatctggaaagtcgcataagagggaa
tctggctcatttgagcacgttagatttgatgaccttcaacaggaatttgatcgtgacccc
catgacatatctgattcacaatatcatgttggacgtacagtgtgggatatcattcccggt
ataagggagagcatgtatccacatcagcgtgaagggtttgaatttatttgggaaaatata
gctggaggaatttatcttgatgagttaagaaacataaacagctcaaacaatgggagtgga
tgcattgtatcacatgctcctggaacaggaaaaactcgtctaacaattgtttttcttcag
acatacatggaactaaatccaacatgccggcctataattattgcacctagcagcatgctc
cttacctgggaagaggagtttttgaagtggaaggttggcattccctttcataacctgaat
aagcgagacttcactctcaaggagaatttttcagctcttaagttcttgatgcaagcttct
ccatcaggacaaactgtggagaatgtacggcttgtaaaactgctttcctggaaaaaggag
aaaagcattttgggagttagttacagattgtttgagagacttgcaggagttcggaagaat
acgaaatgtgataaagtaaggaatgtccttttggagcttcctggtcttgttgtctttgat
gaagggcacataccacgcaacgatgatagtcttatttggatggccttgtctaaaattaaa
acagaaaggcgcatcattctctccggaacaccattccagaataattttactgagttttct
aatacactaaggttggcgaggccaaactttgcagatgcatgtaagtctggaggtaatgaa
tgcccagataagaagcgtggacgcccgaaacatatctcaagaggaaaatgggaccttttg
attagttccatcgacagaactgaaaacttgccggaaagtccggaattgagagaaatcaga
gccttgatcagtccgtttgtgcatgtatacaggggcaacatcctacgtgagaagcttccg
gggttgaggaaatctatagttatattacggccagcagagctgcagaaaagttatcttgaa
agcatagtagggaacaattcttttgaggtggaatatgctgagtccttgatatccgtacac
ccttccctgaaactgaaatgtgataaagaagattttgatatcgacaaggaaatgttagag
aaggttagattgaatcctgaactaggagtgaaaatacagtttctcctcgaaattatacgt
ctgagtgaagctttgaatgagaaagttttggttttcagccaatacattgaaccattgtcc
tttatagatgagaatcttaagtttcattttaattggaatgaaggggtagaggtatttcat
atggatggaaagcgtgatataaagaagcgacaagcattgataaatacatttaacgatccg
acaagtgaggttcgggtgttgcttgcatcaacaaaggcttgctcagaaggtataaacctt
gttggggcttcaagggtagttttacttgatgttgtatggaatccttcagtggaaaggcaa
gctgtatgccgtgcatttagacttggccagaaaaaagttgtttatgtgtatcatctcatt
gcctctgggacaagggaagaggaaaaatacagtcgacaaatgaaaaaagatcggttgtct
gagttagttttctctcctgaacagggcagtaatcaagtaaaagtatcatccacagatctg
gatgacagaattttggaagcagttcttcaacatgaaaagcttaaaaatatattcgaaaag
atagcgtaccaatcaaagcagtccagcatgaatgggaattttggcccggcagactag
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