KEGG   Cucurbita maxima (winter squash): 111491125
Entry
111491125         CDS       T05246                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03030  DNA replication
cmax03410  Base excision repair
cmax03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111491125
   03410 Base excision repair
    111491125
   03420 Nucleotide excision repair
    111491125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmax03032]
    111491125
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111491125
Enzymes [BR:cmax01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111491125
DNA replication proteins [BR:cmax03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    111491125
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      111491125
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 RNB
Other DBs
NCBI-GeneID: 111491125
NCBI-ProteinID: XP_022995654
UniProt: A0A6J1K6J2
LinkDB
Position
Unknown
AA seq 2203 aa
MSVDSRRRGRADNSRSKKQRIIRSAEEEIESKLGFDLFSEGDKRLGWLLTFASSALEDQD
TGKIYSCIDLYFVAQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGQIADIEIL
EKEDLDLKNHLSGLRKAYLKLSFDTVQELMNVKSELLRVVESNWAKSDAAEAYDSILFGR
REQKPQDFVECIVDLREYDVPYHVRFAIDHDVRCGQWYDVSVSSIGVSLEKRKDLLQRAE
VHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGHGYLIINRECVGEDIENLEYTPKPEY
EGFFKVTNVKNELELLKFWFAHMREVKPGIYVTYNGDYFDWPFIESRAAYHGFKMSDEVG
FQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF
AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QAYQANVVCPNKHLSDPEKFYNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYD
QLINNLDRDLQYAIQVEGKTDLELVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDVA
AMYPNIILTNRLQPSSIVTDEVCTACDFNRPEKTCLRKLEWVWRGEVFMAKKSDYYHLKN
QIESEFVDSGSARLSKSFLELPKLEQQAKLKERLKKYCQKAYKRVLDKPVNEVREAGICM
KENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCAL
PGSFPENFTFKTKDLKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKIYKTHSECSIE
FEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELF
DKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQK
SCAVTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYV
RKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVR
EKDDKFRQQKVADMFASSNRGKHSKKNSDVSCSKHVVNEDNSDDLEDFQKKTSSTNGPKP
VARCYDVRGMKHSSTSYSEINSKVQDNFNEGCEPSSPLHVENIDKNVDYNGWLEMKKRKW
KDTLDKRKKQKLVSLRTPGAANDVTRELKGAMNDKEAPRTGVGSYFKRHEGSITRFHWQI
LQLVQSSQSGQYFVWAVVEGVMLKIPITVPRVFYLNSKVPITDEFVGRRVNKTLPHGRHS
YNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSILQIGCVCKVDRTAKKR
NIQDGWSLEELQMKTTTECSYLEKSISFFFVYHSISEGRAIYITFFPSTRSIVVVIVSPY
QNKDLSSTFLERQFRETCQILSGKSQPFESGITCKVDYVVNIKEAEVILQRSITEHRSLN
HGPIVAVIQCPNVQLLKSDVRALDDFPCVSIPFNARDSQYQVLGWQQTAAKIGMQRCAAS
SQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINM
EDVCFVDEVQQPVLTYPGAYRKVSVELKIHHLAVNALLKSSQVNEMEGGSLFGFEHDMQY
GAQLSNEDGGFDEASSSAPTFRVLKQLIQRCLADAVTSGNVYADAILRHLYRWICSPQSR
LHDPALHRLLHKVMQKVFALLLAELRKLGATIIFANFSKIIIDTGRFDLQAAKAYCDSLL
KTVQTRDLFEWIELEPLQFWHSLLFMDQFNYGGIPAKDDESTDIESQVDIVANWNIAEYL
PKKIQDHFVFIISQFLYIPWNYATKQAEARASLPLGDTCTPSITVAAAESFEYRVTEHLK
EQLSSYFSDKLLGIVRDIVLHMKGMDKNTQDILPDQPSGSIHKGDAALEFIKLVCAVLAL
DQNVLHDVLVMRKNLLKYVRVREFAPEAEFSDPCSSIILPNVICSYCDDCRDLDLCRDSA
LLAQEWRCAVPQCEQPYNREVMENALLQIVRQRERLYHLQDLVCVRCKQVKAAHLSEQCA
CAGSFQCKDVEDFFSKMRILLNVATRQKFQLLQEFTSWILEVS
NT seq 6612 nt   +upstreamnt  +downstreamnt
atgagcgtcgatagccgaaggcgaggccgtgcagacaacagtaggtcgaagaagcagagg
ataatccggtccgccgaggaggagatcgaatcaaagcttgggtttgatcttttctctgaa
ggcgataagaggcttggatggttgctcacttttgcttcttcagctttggaggatcaggac
accggaaagatctacagctgtatcgatctttattttgtggcacaggatggcagcagtttc
aagtcaaaatataagtttcgtccttacttctatgcagcgacaaaggacaaaatggaaact
gatgtggaggcttatttgagacgacgttatgaaggtcaaatagctgatattgagatttta
gagaaagaagaccttgatcttaagaatcatctgtctggcttgcgcaaggcatatttaaag
ctatcatttgacactgttcaagaattgatgaacgtgaagagtgaactgttgcgagttgtt
gaaagcaattgggcaaagtctgatgctgcagaagcatatgattctattttatttgggaga
agggaacaaaagccccaagattttgtagaatgcattgttgatcttcgagagtatgatgtt
ccttaccatgttcgctttgctattgatcatgatgtgcgctgcggacaatggtacgatgtt
agtgtatcaagcattggtgtttcacttgagaagagaaaagatcttctgcaacgtgctgaa
gttcacatatgtgcgtttgatatcgagaccacaaagctaccattaaaatttccagatgct
gaatatgacatgataatgatgatttcctatatggttgatggacatgggtacttgattatc
aacagagagtgtgttggagaagatatcgagaatttggagtacactccaaaaccagaatat
gaagggttctttaaagtgaccaatgtgaaaaatgagttagagcttctcaaattttggttt
gcccatatgcgagaggtgaaacctggtatctatgttacctacaatggcgattattttgac
tggccattcattgaaagcagagcagcgtatcatggatttaaaatgagtgatgaagtagga
tttcaatgcgacaagaatcagggggaatgccgttctaaatttgcttgtcatttggattgc
tttgcgtgggttaagcgtgatagttatcttcctcagggtagccaaggtttgaaggccgtg
acaaaagctaaattgggttatgatcctcttgaagtgaatcccgaggatatggtgcggttt
gcaaaggaaaagcctcagatgatggcgtcctattcggtttcagatgctgttgctacatac
tacttgtacatgacctatgttcatcctttcattttttctctagcaactattattccgatg
tcaccagatgaggtgttgcgcaaaggaagtgggactctttgtgagatgcttctaatggtt
caggcttaccaggctaatgttgtgtgtcctaacaaacatctatcagatccagagaaattc
tataacaaccggcttcttgaaagtgagacatacataggtggtcatgtagaatgcctggag
agtggtgtatttagatccgaccttcctaccagttttaggcttgatccatctgcctatgat
caattgataaacaatctggatcgagatctgcagtatgccatacaagtagaaggaaaaaca
gacttggagttagtgtcaaattatagtgatgtgaagaatgctatcatggaaaagcttatt
agattgcgggatgagcctgtacgtgaagagggccctctgatatatcaccttgatgtagct
gcaatgtatcccaacattattttaacaaatagacttcagccgtcgtcaatagtcacagat
gaggtttgcactgcttgtgatttcaatcgtcctgagaaaacttgtctacgaaaacttgaa
tgggtttggcgtggagaagtattcatggctaaaaaaagtgactattatcatctgaagaat
caaattgagtctgagttcgttgatagcggtagtgctcggttgtcaaaatcatttcttgaa
cttccaaagttggagcagcaagcaaagctcaaagaacgtttgaagaaatactgtcagaag
gcttataaacgagtacttgataagccagtcaatgaagttcgagaagcagggatctgcatg
aaagaaaactctttctatattgacactgttcgtagttttcgagatagaaggtacgaatac
aaagggctcaataaagtatggaagggaaaattatcagaagctaaagcgagtggaaattca
atcaagatccaggaagcacaagacatggtagttctttatgattctctacaactcgctcat
aaatgtatcctcaactccttttatggatatgtgatgcgaaagggtgctcgatggtattca
atggaaatggctggagtagttacatatactggagcaaaaatcattcagaatgctcgtctg
ttaattgaaaaaattggaaaaccattggagttagacaccgatggtatctggtgtgcgcta
cctggatcattcccagaaaactttaccttcaaaacaaaagatctgaagaagttgacaatt
tcatatccatgtgtaatgcttaatgttgatgtggcaaggaacaacacaaatgaccagtat
cagacgcttatagatcctgtgaagaaaatatataaaacacatagtgaatgctcaattgaa
tttgaagtagatggaccatacaaggcaatgatccttcctgcttccaaagaagaaggcatt
ttgatcaagaaaagatatgctgtcttcaatgatgatggaacacttgcagagctaaaaggc
tttgagattaagcgtaggggggagttaaagctcatcaaagttttccaggctgaacttttt
gacaagtttcttcacggttccaccttagaagaatgctattcagttgttgcatctgttgca
aatcgctggttagatcttctagataatcaaggaaaagatattgcagatagcgagttgctt
gattatatatctgaatccagtaccatgagcaaatctttggcagactatggagaacagaag
tcttgtgctgttaccactgcaagacgtcttgcagattttcttggtgatacaatggtcaga
gataaaggcctacgttgtcaatatatagttgcatgtgaacctaagggaacacctgtaagt
gagcgtgctgttccagttgcaatctttgagactgatgcagagattatgaaattttatgta
cgcaaatggtgcaagatttcatctgaagttggcatccgatccatcattgactggtcctac
tacaagcaacgtctaagctcagccattcaaaaaattataacaattccagcagccatgcaa
aaggttgcaaatcctgttcctagggttgtccatcctgattggttacataagaaagttcgt
gagaaggacgataaatttcgccaacagaaagtagctgatatgtttgcatcctcaaacaga
ggtaagcattcaaagaagaatagtgatgtcagctgcagcaagcatgtggtgaatgaagat
aattctgacgatttagaagattttcaaaagaaaacaagttctacaaatggccccaaacca
gttgcccgatgttatgatgtcagaggaatgaaacattcaagtacaagctatagcgaaata
aactccaaggtgcaggataattttaatgaaggatgtgagccttcttcacctttgcatgtt
gaaaacattgacaaaaatgtcgattacaatggatggcttgaaatgaagaagcgaaagtgg
aaggatactttggacaagaggaagaagcaaaagctggtaagtttaaggactccaggtgct
gctaatgatgtaacacgggagttaaagggtgctatgaatgataaagaggctcctagaaca
ggtgttggttcatattttaagaggcatgaaggatctataacacgcttccattggcagatt
ttacagcttgttcagagttcacagagtggccaatattttgtttgggctgtggttgaagga
gttatgctaaagattcctattactgttcctagagttttttaccttaattccaaagtacct
attacagatgaatttgtgggtaggcgtgttaacaaaacgcttccccatggaaggcacagt
tacaacctttatgaggttgtgactgatgaaggtcaatttagaacacagaggaacaaactt
gcagccctccttgcagacccagaagtagagggaatctatgaaagcaaggtaccattggag
ttcaagtccatccttcagattggttgcgtctgtaaagttgatagaactgctaaaaaacga
aatattcaagatggatggagtctggaagaactgcaaatgaagactacaacagaatgcagt
tatctggaaaagtcaatctctttcttctttgtgtatcatagcatttctgaaggaagagct
atctacattactttttttccctccacgagatcgatagttgtggtgatagttagtccttac
caaaacaaagacttgtcatcaacttttcttgaaaggcaatttcgcgaaacttgtcaaata
ctgtccggtaaatcacaaccatttgagagtggtataacttgtaaggttgactatgttgtt
aacatcaaagaagctgaagtgattttgcaaagatcgataacagaacacaggagcttaaac
catggacctattgtagctgtaattcaatgcccaaatgtgcaactgctgaagtcagatgtt
cgagcattagatgattttccatgtgtgagcattccttttaatgctcgggatagccaatat
caggttcttggttggcaacaaacagctgcaaagattggaatgcaacgttgtgctgcatca
tcccaatggttgaatgagagaatctctcttgcaagatatgcccatgtaccattaggaaat
tttgaacttgattggctaatttttacagcagatatatttttttcaagagcactacacgat
caacagcaggtactttggatatcggatgatggtgttccagatataggaggcattaacatg
gaagacgtgtgttttgtggatgaggtccaacaacctgttctgacgtaccctggagcatat
agaaaagtttccgtggagctgaagatccaccatttggcggtcaatgccctgctgaagagc
agccaagtgaatgaaatggaaggaggtagtttgtttggctttgaacatgatatgcaatat
ggagcccaactttctaatgaagacggtggctttgacgaggcttcatcatctgcgccgaca
tttcgtgtcctgaaacaattgatacaaaggtgtcttgcagatgctgttacatctggaaat
gtatatgctgatgcaattttgcggcatctgtaccgatggatttgcagcccccaatcaaga
cttcatgaccctgctcttcatcgcttactccacaaggttatgcaaaaggtgtttgctctt
ttgttggctgagctacgaaaattaggtgccaccattatatttgcaaacttctcaaaaatt
attatagacacgggaaggtttgatctccaggctgctaaagcatattgtgatagcttgctg
aaaacagtgcaaacaagggatctgtttgagtggattgaattggaaccgttacagttctgg
cactccctgttgtttatggatcagtttaactacggtggaatcccagcaaaagatgatgag
agcacagatattgaatctcaagttgatatagtggccaactggaacattgctgaatatcta
cccaagaagattcaggatcacttcgtttttatcatctctcaatttttgtatattccatgg
aattatgcaaccaaacaagctgaagcaagagcatcattgccgcttggtgacacatgtacc
ccatctattacagttgcagctgctgaatcgtttgaatatcgtgttacagaacatctcaaa
gagcagctaagctcttacttcagcgacaaactgttgggaattgttcgtgatattgttctt
catatgaaagggatggacaaaaacacccaggatattttaccagatcaaccttcgggtagc
atacataaaggagatgctgcattggaattcattaagctcgtatgcgctgttttggctctt
gatcaaaatgtcctgcatgatgttctggtaatgaggaagaatttactgaagtatgttcgt
gtaagagagttcgcaccagaagcagagttttctgatccatgctcgtccataatcttaccg
aacgttatttgcagctattgtgatgattgtcgagatttggacttgtgccgtgactcggct
ttactagcacaagaatggcgctgtgcagtgccacaatgcgaacaaccatacaaccgagaa
gtgatggagaacgctctgcttcaaatcgtgaggcagagggagcgcctctatcacctacag
gatctggtatgcgttcgctgcaagcaagtcaaagcagctcatttgtcagaacagtgtgct
tgtgctggctcatttcaatgcaaagatgtggaagattttttcagcaagatgaggattctc
ctcaacgtagccactcgtcaaaagttccaattgttgcaagagttcacctcctggatctta
gaagtctcataa

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