Cucurbita maxima (winter squash): 111491607
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Entry
111491607 CDS
T05246
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111491607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111491607
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111491607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
111491607
NCBI-ProteinID:
XP_022996347
UniProt:
A0A6J1K1N5
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MSLDLLLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATVTRLIREYN
VRASSSSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLL
EDETGQSQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSIGATGRGRRKPTSDENEGNVSDRG
EEDEEEEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIESIGDDWEHEEIFTDDDE
TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRSGGLNDSD
GEEEEDDDDDDDAEEESGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTSSTAKTAK
GKRKNGEDVKPSSAPPKKMKTETESKSTDEGMSTSRSTASKGAAASVKTEPASASGPVTE
EEIRAVLRQRTPVTTQDLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKP
ED
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggatttgctgctgaagccgtcgtgcagtggatgcggatccacgacggagttg
tatgggagcaattgcaagcacatgacgttgtgcttgagctgtggcaaaactatggctgag
aataagggcaaatgttacgactgtggtgctactgttactcgcttaataagagaatacaat
gttcgagcgagttcaagtagcgacaagaactacttcattggtcggttcatgagtgggctg
ccaaacttttcgaagaaaagaaatgccgagaataaatggtctctttacaaggaaggtcta
caaggacgccagcttactgatgccctgcgggaaaagtacaagaatagaccctggctcttg
gaagatgaaactggccaatctcaattccaaggccatctcgagggttcacaatcagcaaca
tattacttgcttgtattgcaaggaaaggaatttactgccattcctgcaggttcttggtac
aacttcaacaaagtggcacagtataagcaacttacattggaggaggcagaagagaaaatg
aagaaccgaaagaagacagcggatggatatgaaagatggatgatgaaagctgcaagtaat
ggtcctgcggcatttggtgaagttgagaagtttgacgacaaagatagtattggtgctact
ggcaggggacgcagaaaacctactagtgatgagaatgaaggtaatgtttcagatagggga
gaagaagatgaagaagaagaggcagcaaggaagaacagattgggactcaacaaaaagggt
ggtggtgatgatgatgatgaggaaggccctaggggaggtgaccatgacttggatgatgat
gatatcgagtcgataggagatgattgggagcatgaagagatttttaccgatgatgatgaa
actactgctccagatcgtgaagaaagggaggatttagcccctgaagttccagcacctcca
gagattaaacaggatgaagaagacgaggatgaagaaaatgaaggagagggggggctcagc
aaatctgggaaagagttgaagaaattgcttagacgttctgggggccttaatgattcagat
ggagaggaggaggaggacgacgacgacgacgacgatgcggaagaggagagtggtggcact
ccagttgcgccttcaaagcagaaggatgcagttaaagaagaagctgcagccaacagtccc
tcaaaaccagctccttctggatctgctaagggaacctcttctactgcaaagacagcgaag
gggaaaagaaaaaatggcgaggatgtgaaaccatccagtgcacctccaaagaaaatgaaa
acagagacggaatcaaagtcgacagatgaaggcatgtctacttctagaagtacggcctcg
aaaggtgcagcagcatcagtcaaaacagaaccagcatccgcttctggacccgttactgag
gaagaaattagggctgttttgcgacaaaggacacctgtaactacacaggatcttgttgca
aaattcaaagcaagactacgatctcacgaggacaagaatgcttttgctgaaatactgagg
agaatttcaaggattcaaaagacgaatggaggaccaagctatgttgtgttgagaaaacct
gaagactag
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