Cucurbita maxima (winter squash): 111491646
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Entry
111491646 CDS
T05246
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111491646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111491646
Spliceosome [BR:
cmax03041
]
Common components
Common spliceosomal components
SR proteins
111491646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
111491646
NCBI-ProteinID:
XP_022996414
UniProt:
A0A6J1K1U7
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MSSRFSRTIYVGNLPSDIRENEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSDHRSNYGGSGGGGGRFGVSKRSEYRVIVRGL
PSSASWQDLKDHMRKAGDVCFAEVSHDSEGTFGTVDYTNYDDMKYAIRKLDDTEFKNPWA
RAYIRVKKYEGSPTRGRSRNRSRSRSRSRSRSRSRSRSRSAKRNRSKSAEQSVSRSVSRS
RSLSPVKSSRRRSKSRSGSPREAREGSG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtttttcccgcacgatatatgttggaaacttgccctcagacataagagag
aatgaaattgaagatttgttctacaagtatggtcgaattttggatattgaattgaagatt
ccaccgcgccctccatgttattgttttgtggagtttgagaatgttagggatgcagaagat
gcaattcgaggtcgtgatggatataattttgatggttgccgtctaagggttgagcttgca
catggtggtagaggcccttcatcaagtgatcatcgtagcaattatggtggcagtggtggt
ggtggaggacgttttggtgtttcaaaacgatcagaatatcgagtgattgtacggggactc
ccatcttctgcttcttggcaggatttgaaggatcatatgcgcaaggctggtgatgtgtgt
tttgctgaagtttcccatgacagcgaagggacatttgggactgttgattatacaaactat
gacgacatgaagtatgctattcgaaaacttgacgatacagaattcaaaaatccttgggca
agagcatacattcgggtgaaaaagtatgaaggcagtcccactaggggtcggagcagaaac
agaagcagaagccgtagtaggagccggagccggagccgaagccgaagccgaagccgaagt
gcgaagcgaaataggagcaaatcagccgaacaatctgtttctagatcagtttcaagatca
agatctctatcccctgttaaatcttcaagacgacgttcaaaatcaagatctggatcacca
cgtgaggcacgagaaggtagcggatga
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