Cucurbita maxima (winter squash): 111491730
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Entry
111491730 CDS
T05246
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111491730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111491730
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111491730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_VPS8
WD40_RFWD3
WD40_like
VPS8_N
Ge1_WD40
Nbas_N
VID27
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
111491730
NCBI-ProteinID:
XP_022996501
UniProt:
A0A6J1K4Z0
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGIFEPYRAIGYITNSVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVGPQLPKKIR
ALASYREYTFAAYGSDIAVFKRAHQVANWSSHNAKVNLLLLFGDHILSVDINGNMFMWHF
KGNEDSPSPVGQVTLEGQFSPSCIMHPDTYLNKVMLGSLEGSLELWNISSKKKLYEFKGW
NSSVCCCVSSPALDVVAIGCADGKVHVHNIRYDQELFSFTHSTRGSVTALSFSSDGQPLL
ASGGSSGVISIWNLEKRRLQSVIREAHDSSIVSLHFLANEPVLMSSSTDNSIKMWIFDTT
DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKR
AKKLKLKEEEIKLKPVIAFDCAEIRERDWCNVVTCHVDTPQAYVWRLQNFVLGEHILKPC
PENPTPIKACAISACGNFAFLGTEGGWIERFNLQSGASRGSYLDKKEGRNAAHIGEVVGL
ACDSTNTHVISAGVGGDIKVWNFKERDLKSRWEIGSSVVKIVYHRVNGLLAVVTDDLVIR
LFDIVASRMVRKFEGHTDRITDLSFSEDGKWLLTSSMDGSLRIWDVILARQIDALQVDAS
ITAFSISPNMDILATTHVDQNGVYLWVNQLMFSGSSNVDTLASGKDIVNVKLPSVSTTEG
MEFEGCDENPSKPPESKDLSGFHISSQQIPDLITLSLLPRSQWQSLVNLDIIKARNKPLE
PPKKPEKAPFFLPSLPSLSGEILFKPSESANTERAEKGVDNEQHKKSDITSSQFLQILES
SSEVQNFSAFTDYIKGLSPSTLDLELRMLQIIDDDDRQEPEKRPELISIELLLDYFIHEI
TCRNNFEFIQAFIRLFLKIHGETIRCQLTLQEKARKLLDIQSSVWQGLDKIFQSSRCMVT
FLSNSQF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggaatatttgaaccttacagagcaattggttacattacgaacagcgtccccttctct
gtgcagagactcggaaccgaaaccttcgtcaccgttagcgttggcaaagcttttcaagtt
tataattgcgcgaagttaaacttggtgctcgttggccctcaattgccgaagaagattcga
gctcttgcttcctaccgtgagtacacgtttgctgcttatgggtctgacattgcagttttc
aagcgtgctcatcaggtagcaaattggagtagccataatgccaaggtcaacttgttgcta
ttgtttggagatcatatcctaagtgttgacattaatggaaatatgttcatgtggcatttc
aaagggaatgaagatagtccttctccagttggacaagtcacattagaaggacaatttagt
cctagctgtataatgcatccagacacatatctaaacaaggttatgcttggaagtctggag
ggttctttggagctttggaacatcagctcaaagaaaaaactctacgagttcaagggatgg
aattcatctgtatgctgttgtgtttcgtctcctgctctagatgttgttgccattggctgc
gctgatggaaaggttcatgttcataacattcgttatgatcaagaattgttttcgttcaca
cactcaacacgaggatctgttactgccttatctttcagctcagatggacagcctcttcta
gcatctggaggttcatcaggtgttattagcatatggaatcttgagaagagaagacttcaa
tcggtgattagagaagctcatgatagctcaatagtttcacttcactttttagctaatgag
ccagtcctgatgagttcatcaacagataattccatcaaaatgtggatttttgatacaaca
gatggagatcctcgtttgttacgctttcgcagtgggcatagtgcccctcctctatgcata
agattttatgcaaatgggagacacattttatctgctggtcaggatcgtgccttcaggctt
ttctctgtaatccaggatcagcaaagcagggagctttctcaacggcatgtggctaaacgt
gcgaagaaactaaaacttaaggaagaagaaataaagttgaagcccgtcatagcttttgat
tgtgctgaaattagagagcgcgattggtgcaatgtggttacatgtcatgttgatactcca
caagcttacgtatggagacttcaaaactttgttcttggtgagcatatcttgaaaccatgc
ccagaaaacccgacgccaattaaggcttgtgcaatcagtgcatgtggaaattttgccttc
ttagggacagaagggggttggattgagcgattcaatcttcaatcgggtgctagtagaggt
agttacttggataaaaaggaaggaagaaacgctgcacatattggagaagttgtcggtctt
gcttgtgattctacaaatacccacgttataagtgcaggagttggtggagatataaaggtt
tggaatttcaaggagcgtgatctaaaatccagatgggaaattggtagttctgttgtgaag
attgtctatcatcgagtaaatggacttttggcagtggtaactgatgatttggttatccgt
ctgtttgacattgtggcttcaagaatggttcgtaaattcgaaggtcatacagatcgtata
accgatttgtctttcagtgaggatggaaaatggcttttaacatctagtatggatggaagt
cttagaatttgggacgtcattttagcaaggcaaatcgatgcactacaagttgatgcttcg
attactgcattttctatttctccaaatatggatattttggcgactacacatgtagatcaa
aatggagtctacctctgggtgaatcaattaatgttctctggttcatcaaacgtggatacc
cttgcaagtggaaaggatattgttaatgttaaattgccatcagtctccaccacagaagga
atggagttcgaaggttgcgacgagaatccttcaaaacctcctgaatctaaagatttatca
ggctttcacatctctagccagcaaatcccagatttaattacactttcactgttgcccaga
agtcagtggcagagcttggtcaatttggacataataaaggcccgtaataaaccactcgaa
cctccaaagaaacccgaaaaggctcctttcttcctaccatctcttccttctctctctgga
gaaatactatttaagccttctgagtcggcaaacacagagagggcagaaaagggagttgat
aatgaacaacacaaaaaatcggatataacatcgtctcaattcttgcagattcttgaatct
tcttctgaagtacagaacttctcagcctttactgattacataaagggtttatccccatca
acgttggatttagaacttcgcatgcttcaaattatagacgacgatgatcgtcaagaaccc
gaaaagagacctgaacttatatcaattgaattgcttcttgattatttcatacacgaaatt
acttgccgcaacaacttcgagttcatccaagcctttatcagattgttcctgaagatacac
ggcgaaacgattcgttgccagttgacattgcaggagaaggcaaggaaactcctggatatt
cagagctcagtatggcaaggtttggataaaatattccaatcctctagatgtatggttact
tttcttagcaactcacagttttag
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