Cucurbita maxima (winter squash): 111491797
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Entry
111491797 CDS
T05246
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111491797
03036 Chromosome and associated proteins [BR:
cmax03036
]
111491797
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111491797
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111491797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Tex_central_region
HTH_44
Spt6_S1
HHH_9
HHH_3
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
111491797
NCBI-ProteinID:
XP_022996607
UniProt:
A0A6J1K2G0
LinkDB
All DBs
Position
Unknown
AA seq
1606 aa
AA seq
DB search
MGKAVISDDEDEVELEDREPLDGDDVDGHNMRDEDDEEDEEEQDEYEKDGFIVDDIEEED
EEDVEEREDSDDEKQRKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARR
DNVEPSGFLDDEDFIESSRGGRTAEEKLKRSLFGDDEAPLEDIAEELEQPEEEEDVDIGD
EDEMADFIVDEEVDEDGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKR
ELDTHEWHENRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGSPPMDEMSLD
DEASWIHGHIANGMNSLFGNASGQDLSVTKDDILQFLDLVHVQKLDIPFIAMYRKEEILS
LLKDTEHDAGNDQDKNDKTPTLKWHKVLWAIQDLDKKWLLLQKRKKALHLYYRKRFEEEL
RRDDDVTRQSLNSQLFDSVKKSLEAAESEREVDDVDSKFNLHFPTGEVGVVDEGQFKRPK
RKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMF
ESPQAVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTNPTSDGNAAIDSFHQFSVVK
WLREKPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQL
WNEQRKLILQDALSGFLLPSMEKEARSVMTSKAKKWLLTEYGKNLWNKISVGPYQHKEND
ISSDEEAAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTLRSQNVNDQQRKKNDQ
ERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDE
SLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLEN
FLTPDEKYGMVEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRA
GSIFTRKDFVTVHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQE
LAKDVFDEDIKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKWEDKRETFLDIKG
ELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLT
GMLMKEDYADGSREISDLSERLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITR
NLDPYYHEDRSSLQTEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGE
SIVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGDDTFEDLD
EVMDRYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTF
ILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAM
VPMRSPATGGSSAASAGSPWGGSSHDGSWRSQSYDRDRSSTPGSRTGRNDNRNSGGRDGH
PSGLPRPYSGRGRGRGSYNNNRGNNERPDSSYDGSRWDSSSKDGDDGLSNFPGAKTQNSP
GKEAFPGGSGGGGGNGWSDSKGGGGGGWGGTGASLVGNSGGGVHNS
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggcggtgatctccgatgacgaagatgaggtcgaattggaagaccgggaaccg
cttgacggtgacgatgttgacggtcacaacatgagggacgaggacgacgaagaagatgaa
gaagaacaggatgagtatgaaaaggatggtttcatagttgatgatattgaagaagaagat
gaagaagatgtagaggagagggaagacagtgatgatgaaaagcagaggaagaagaaaagg
aagaaaaaggaggaatatgtgctcgatgaagatgactatgaactccttgaggacaacaat
attagcattcaacgaccaaagggcagcaaaaagtttaagaggcttaaaaaagctcgaagg
gacaatgtggaaccttctgggtttttggacgatgaggattttatagaaagcagcagaggt
ggacgaacggctgaggaaaaacttaaacgtagcttgtttggtgatgatgaagctccactt
gaggatattgcggaagagttggaacaacctgaagaggaagaagatgtcgacattggagat
gaggatgaaatggctgatttcattgtagatgaagaagttgatgaagatggggctccctta
aggaggaggaagttgaagaaaaaaaaatccaggcaagcacccggtgtttcatcaactgct
ttgcaggaggcacatgaaatttttggcgatgtcgatgagctccttcagcttcgcaagaga
gaattggatactcatgagtggcatgagaatagattagaagatgaatttgaaccgattgta
atttctgagaagtatatgacagaaaaagatgaccagataagggagattgatatgcccgaa
agaatgcagatttcagaagaaagtaccgggtctcctcctatggatgagatgagtctggac
gatgaagcctcatggatacatggtcatattgccaatggaatgaactctttgtttggcaat
gccagtggccaagacctatctgtaacaaaggatgatattctgcagtttctggatcttgta
catgtccaaaaattagatataccattcattgccatgtataggaaggaggagattctaagc
ttgttaaaagatacagaacatgacgctggtaatgatcaggataaaaatgataaaacacca
actttaaagtggcataaggtactttgggcaattcaagacttggacaaaaagtggctgctt
cttcaaaaaagaaaaaaggctcttcacttatattatagaaagcgatttgaggaagagtta
cgcagggatgacgatgtaactagacaatcattgaatagccagctttttgactcagtcaag
aaatctcttgaggcagctgaatcagagagagaggtagatgatgttgactcaaagtttaat
ttgcattttcctacaggtgaagttggtgttgttgatgaaggacagttcaaaaggcctaag
aggaaatcactgtatagtatatgtagtaaggctggtttatgggaggttgcaggaaaattt
ggttatagctctgagcaattcgggttgcaactctccttagaaaagatgagaaatgatgag
ttggaggatccaaaggaaactcctgaagagatggcatcaaactttacctgtgccatgttt
gagtctcctcaagctgtactcaagggagcaagacatatggcagctattgagattagttgt
gaaccttgtgtaaggaagcatgtcaggagctactttatggactatgctgtgatatcaaca
aatcctacgtcagatggaaatgctgcaatagattcgtttcatcaattttcagttgttaag
tggcttcgtgaaaagccattaagtagatttgaggatgcacagtggcttcttatacagaag
gctgaagaagaaaaacttctgaatgtcactctcaagctacctgaaaagcatttaaacaag
ttgataaatgattttaatgaatattatcttagtgatggtgttagcaaatctgctcagctt
tggaatgagcagaggaagttaatattgcaggatgcgctttctggttttcttctgccctca
atggagaaagaagcaagatccgtgatgactagtaaagcaaagaagtggttacttacggaa
tatgggaagaatttatggaataaaatatctgttggtccatatcagcacaaagaaaatgat
attagttctgatgaagaagctgccccaagggtaatggcatgctgttggggtcctggaaag
ccagctaccacctttgtaatgttagactcagcaggtgaggtgcttgatgttctttatact
ggatctctcaccctacgttctcagaatgtgaatgaccaacaaaggaagaaaaatgatcaa
gagcgagttttgaagttcatgacagatcatcaaccacatgttgttgttttaggagctgtt
aatttatcttgtacccgattgaaagatgatatctacgagatcatctttaagatggtggag
gagaatcctagagatgttggacatgagatggatggattaagcattgtatacggtgatgag
tcccttcctcgtctgtatgaaaattctaggatttcctctgaccaattgcaagggcaatca
ggcattgtgaaacgtgctgttgctcttggacgttatctgcaaaatcctttggctatggtt
gcgacactttgtggtccaggaagggagatcttatcttggaaactaaatcctttggagaat
tttctgaccccagatgaaaagtatgggatggttgaacaagttatggtgaatgtgaccaac
caggttggcctggacactaatttggctataagccatgaatggttgttcagcccattgcaa
ttcatagctggccttggacctaggaaggcagcttctttgcagagatctttggtgagggca
ggatcaattttcacacggaaggactttgttacagtacatggtcttggtaaaaaggtattt
gttaatgcagttgggttcttgcgtgttaggcggagtgggttggctgcgagcagcagccaa
tttatagatttattggatgatacgagaattcatcctgaatcttatgccctggcgcaagaa
ttagcgaaagatgtttttgatgaagatattaaaggtgatgctaatgatgatgaggatgca
gagatggccatagagcatgtcagagaccggcctcatttactgagaactcttgatgttgat
gaatatgccaagagcaaaaaatgggaagataaaagagaaacttttctcgacataaaagga
gaactgatgcagggttttcaggattggcgtaagcaatatgaagagcccagtcaggatgaa
gagttttacatgatatctggtgaaacagaggatacacttgcagaagggagaattgtgcag
gccacagtccgcaaggtactaggtcaaaaagcaatttgtggacttgaatcaggattgact
gggatgcttatgaaagaagattatgccgatggttctagagagatttctgatttatccgaa
aggttgcatgagggggatattgttacttgcaagatcaaatcaattcagaagaataggtat
caggttttccttgtttgcaaggagagtgagatgagaagtaatcggcaccagattactcga
aatcttgatccctactatcatgaagatcgaagcagcctacagactgagcaagaaaagtct
cggaaagagaaggaacttgcgaaaaagcatttcaagccaagaatgatcgtacaccctcga
ttccagaatataacagcagatgaagcaatggagctcttgtctgacaaggatcctggtgaa
agtattgttcgacctagttctcgtggaccttcttttttgactttgacacttaaaatttac
gatggggtatatgctcacaaggatatagttgaaggtggaaaggagcataaggacatcact
agcttattgcgtattgggaagaccttgaaaataggggatgacacttttgaggacctggac
gaggtgatggatcgctatgttgatcctttagttgctcacttaaaggcaatgctaagttat
cgcaagttcaggaggggcacaaaagcagaagttgatgaacttatgaagattgagaagtca
gagtatccaatgagaatagtttatggctttggaatatctcatgaacacccgggtacattc
attttgacatacatacgaagcacaaatccacaccacgagtatattggtctctatccaaag
gggtttaaatttaggaaaagaatgtttgaagatattgataggcttgtggcctattttcaa
aggcacatcgatgatccccagcatgattcagcaccatcaattagatcagttgctgctatg
gtaccaatgcggagccctgcaactggtggctcttcagcagcatctgcaggtagcccttgg
ggtggttcatcacatgatggtagctggagaagccagtcatatgatagggatcgttcttct
actcctgggtctagaacagggagaaatgacaacagaaattccggtggtcgtgatggacat
ccaagtggtctgcctagaccatacagtggacgtgggcgtggtcgaggctcatacaataat
aatagagggaataatgagagaccagattctagttatgatggctccagatgggattcatct
tcaaaggatggggatgatggattaagcaacttcccaggagctaaaactcaaaattcacct
ggaaaagaagcctttcctggtgggagcgggggtggtggtggtaatggatggagcgacagt
aaaggcggtggcggtggaggttggggtgggactggtgcgagtttggtaggtaacagtggg
ggtggggttcataactcttaa
DBGET
integrated database retrieval system
