KEGG   Cucurbita maxima (winter squash): 111492024
Entry
111492024         CDS       T05246                                 
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
  KO
K03093  RNA polymerase sigma-I factor
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmax03021]
    111492024
Transcription machinery [BR:cmax03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     111492024
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 HTH_31 KIF21A
Other DBs
NCBI-GeneID: 111492024
NCBI-ProteinID: XP_022996943
UniProt: A0A6J1KCF5
LinkDB
Position
Unknown
AA seq 558 aa
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
ALKTYTCLSEAPQTLADGLLDLEEKEVEINSGAKSLSHLHYGSKNSGPSKVEDNFCSCTS
LPTGRASPFDMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS
SFRDLSDLPIEVGGDHNVNQKTDDQNHNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT
RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETLEKESGRTASMSC
WADASSIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
GRRYSDDDVAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLRVSKEWVRKIERKA
TTKLKNEETVRNLSHYLD
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgggaacaagtttccgcccaaatctcaagtgggctttccaaattcagactcattcccgc
agggcctccccttccaagctctctccctatgcctctaaaggcagggaagcttcctttaat
tcaggaaggctttcgttcttctccagtacttgtgaggaaggagaggctatttctagagaa
gccttgaaaacatatacttgcttatctgaagctccacaaaccttagccgatggtctgtta
gatttggaagagaaagaggtagagataaacagtggggcaaagtcactcagtcatttgcat
tacgggtcgaaaaattctgggccatccaaggtagaggacaatttttgttcctgtacaagc
ttgcctactggcagggcctcgccttttgacatgttaatggaaaaccttgatgttttggag
gaaacttttactgaatcaggcatgctaagcttggaaagagatattgtattgcaactaaca
aaacttggagctttggagtttttcaatgcctgtctgtctaggacgcttaaagcatcatca
agttttcgtgatttgtcggacttacctattgaggttggtggagatcataatgtaaaccag
aaaaccgatgaccagaaccacaatatcatagtttactctggaaaaagagcaggaagaaga
tcagtaaaaaggagagcaatggataatgctgataaagttgcttcacggccgctagctaca
agagctgctaaagaaaaattccgtagttcgaggaaaaaagcatctaattcgaaaaaaaga
agatcgattgttgctcgaaatgaagctgaaatgtccaccggggttaaggtagttgcaaat
ttagaaagaattagagaaactttagaaaaggaatccggaagaacagcaagcatgagttgc
tgggccgacgcatccagcattgatataaaggacttgcagaaacagttacaatttggttgg
ttctgccaggatgagctcttaaggagtactaattcattggttatattccttgcaaagaaa
tatcgatgctccgggttaccaatggaggacttggttcaggcaggagccattggcgtgctg
caaggtgtggaaaggtttgacccgaaaaggggttttagattctcaacctatattcaatac
tggataaggaaatcaatgtcgagagtcgtggcacgaagttcaaggggaattcaaattcca
tggtcattaaccaaggcaataaatcaaatacagaaggctcgaaaagcgttgaacaacagt
ggtaggagatattcggatgacgatgtagccaaggctactggtcttcctttggccaaggtt
agagttgctagcaactgtttaaaagttgtgggttcagttgatcagaagataggtgatgga
ctaaatatgaaatatatggaattgacagcagatacatcaatagagagcccagaagacact
gtgaagcggaggctaatgaagaaagacatctttaatcttcttgaagtgttggaatcaagg
gagagacaggtcctggtgctgcgatacggactcatggattcccaacccaagtcgctcgag
gaaatcggaaaacttctgcgcgtaagtaaggaatgggttcgaaaaattgaaaggaaagcc
acaacaaagctgaaaaatgaagagactgtgagaaacttgagccattatttggattga

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